Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGTGATCCTGGAAACCCTGACCCAGCACGGCAACCAGCAGATCATGGCGCAGGCCTACCTGCCGCAGATCGTCGACGGCGACAAACGCATCCTGATGATC GACGGCGAGCCGGTGGACTACTGCCTGGCGCGTATCCCGGCCAGCGGCGAGACCCGTGGCAACCTGGCCGCCGGCGGCCGTGGCGAAGCACGCCCGCTGA CCGACCGCGACCGCTGGATCGCCGCCCAGGTCGGCCCGACCCTGCGCGAGAAGGGCCTGATGTTCGTGGGCCTGGACGTGATCGGCGACTACCTCACCGA AATCAACGTCACCAGCCCCACCTGCATCCGCGAGATCGATGCCGCCTACAACACCGATATCGGCGGGCAATTGATGGATGCCATTGATCGCCAGCTGAAG GCGCGCTGACCGCCGACGCACGGCAACAACCCAGAGTGGGGTATGATGCGGGTCCTTTTAGCCTGGCCTGCTGCCCCGCCCTGCGGTTGCTGGAAACCCG
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DNA Sequence for Gene |
>X970_23530
ATGACGCTGCCCGCTGACATCCCCGCCGACCTGCTGCCCCCCCGTGTTCGCCCGGTGGACCGGCTCGGCTTTACCCTGTTCCTGGCTGCCCTGGTGCACC TGGCGCTGATCCTCGGCGTCGGCTTCAGCGTGGTCAAGCCTGCCGAAATCCGCCACACCATGGACATCACCCTGGCCACCTTCAAGAGCGAGAAACCGCC GGAGAAAGCCGATTTCCAGGCCCAGGACAACCAGCAGGGCAGCGGCACCCTGGACAAGAAAGCGGTACCCAAGACCACCGAACTGGCACCGTTCCAGGAC AGCAAGATCAACAAGATCACCCCGCCACCCGCCGCGAAGCCCGAGGTGGTACCGCCCCCTGTCCCGCAGAAGTCGGCGGTAGTGACCACGGCGCCCAAGC CGCAGAAGGTCGAGCCCAAACCCAGGGAAAGCAAACCGCAGCCCAAGCCGGCAGCCCCGGCACCGGACTTCGACAGCTCACAGTTGTCCAGCCAGATCGC CAGCCTGGAGGCGGAGCTGTCCAACGAGCAGCAGATGTACGCCAAGCGCCCGCGCATCCACCGGCTCAATGCCGCCTCGACCATGCGCGACAAGGGGGCC TGGTACAAGGAAGAGTGGCGCAAGAAGGTCGAGCGGGTGGGCAACCTGAACTACCCCGATGAAGCGCGCCGGCAACAGATCTACGGCAACCTGCGCATGA TGGTGTCGATCAACCGCGATGGCTCGTTGTACGAGGTACTGGTGCTGGAGTCGTCCGGGCAACCGGTGCTTGACCAGGCGGCGCAGCGCATCGTGCGGCT GGCGGCGCCGTTTGCGCCGTTTACCGGGGACCTGGCCGAGTTTGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGT AACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTGCGGCATTACGCGGTCCCTGTGGGAGCAGGTTTACCCGCGAAAGCGTCCGACTAAGCGACATCATTGCCTGATCTGGCGCATTCGCGGGTAAACCCG CTCCCACAGGGAACGCGCAAGCCTCGTTACGCACCTTGTCAGCCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCACGCCGAGCTACCTCAA GCATCAGTTCCTGATCGCCATGCCACACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTACATCGTCGAGCACAACGCCCATGGCGCCATGGGCCTG GTGGTCAACCGGCCGCAGGAGCTGAACCTGGCCGACATCCTCGAGCAGCTGCGCCCGGACGAAATGCCACCGGCCAGCACCTTGCAGGTGCCGATCTACC AAGGTGGCCCGGTACAGACCGACCGTGGCTTCGTGCTGCACAGCAGCGAATGCAGTTTCCAGGCCACCGTGGCGCTGGATGGGCTGTCGCTGACCACCTC
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Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MTLPADIPADLLPPRVRPVDRLGFTLFLAALVHLALILGVGFSVVKPAEIRHTMDITLATFKSEKPPEKADFQAQDNQQGSGTLDKKAVPKTTELAPFQD SKINKITPPPAAKPEVVPPPVPQKSAVVTTAPKPQKVEPKPRESKPQPKPAAPAPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMRDKGA WYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSGQPVLDQAAQRIVRLAAPFAPFTGDLAEFDRLEIIRTWRFARGDRLSS N
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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