Pseudomonas monteilii SB3101, X970_21285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGCCGAACAGGTCATTAGCCTGATCAAGGCCGAGCAGGCCAAAGGCATCAGCCTGTCGCGGATTTTCCTGGCTGGCTTCTCCCAGGGTGGCGCGGTGG TTCTGCACACTGCCTATATAAAGTGGCAAGAAGCGCTGGGTGGCGTGATCGCCTTGTCCACCTACGCCCCCACCTTCAACGACCAGCATCAGTTGAGCGC CTGCCAGCAACGCACCCCGGCCCTGTGCCTGCATGGTGTGCACGACCCGGTGGTGATCCCTTCCATGGGCCGCACCGCCTTCGAGTACCTCAATACCTGG GGCGTTGCCGCCCGCTGGCACGAATACCCGATGGAACACGAAGTGGTGGTGGAAGAGTTGAGCGACATCCACGACTGGCTGAGCAAGCAATTGCAATAAG CCAGGGCTGTCTGTAGTTGTAAGGCTATTCCACTACGCCGCGCCTGAATCTTGCATTACACTGCCCGGCGTACATTCCTTAACCAGTTGATGAGACGATC
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| DNA Sequence for Gene |
>X970_21285
GTGCTCAAGGCACTCAAGAAAATTTTCGGCAAGGGAGACGCCGCGCCACAGGCCGTCGCTCCTGCTGCCAGCGTGACGCCCCCTGCGCCCGCACCCGCCA GCGAGGCCCGGCCTGCGGAAAAACCGGCCGCACCACGCGCCACCCCCACTCCCCAGGCCGAACAGCCTGCCGCCGTTACGCCAGCCGCCGACAAGCCGGC CAAGGACAAACCGCGTCGCGAGCGCAAGCCCAAGCCGCAGGCCAGCCTGTGGAAATCGGAAGACTTCGTGGTCGAGCCACAGGAAGGCAAGACCCGCTTC CACGACTTCAAGCTGTCCAACGAACTGATGCATGCCATCCACGACCTGGGCTTCCCGTACTGCACGCCTATCCAGGCACAGGTGCTGGGTTACACCCTGC GCGGTCAGGACGCCATCGGCCGGGCCCAGACCGGTACCGGCAAGACTGCGGCGTTCCTGATCTCGATCATTTCCCAGCTGCAGCAGACGCCGCCGCCGAA GGAACGCTACATGGGCGAGCCACGTGCGCTGATCATCGCGCCCACCCGTGAGCTGGTGGTACAGATCGCCAAGGACGCCATCGCCCTGACCAAGTACACC GGCCTGAACGTGATGAGCTTCGTCGGCGGAATGGACTTCGACAAGCAGCTCAAGGCCCTGGAAGCGCGCCATTGCGACATCCTGGTGGCCACTCCGGGGC GCCTGCTGGACTTCAACCAGCGCGGTGAGGTGCACCTGGACATGGTCGAAGTGATGGTGCTGGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCCC CCAGGTGCGCCAGATCATTCGCCAGACGCCGCCGAAAAGCGAGCGCCAGACCCTGCTGTTCTCCGCCACCTTCACCGACGACGTGATGAACCTGGCCAAG CAGTGGACCACCAACCCGGCCATCGTCGAGATCGAGCCGGAGAACGTTGCCAGCGAAACGGTGGAGCAGCACGTCTATGCGGTGGCCGGCAGCGACAAGT ACAAGCTGCTGTACAACCTGGTGACCCAGAACAAGTGGGAACGGGTGATGGTGTTCGCCAACCGCAAGGACGAAGTGCGGCGCATCGAGGAAAAACTGGT GCGCGACGGCATCAATGCCGCGCAGTTGTCGGGTGACGTGCCGCAGCACAAGCGTATCCGTACCCTGGAGAACTTCCGCGAAGGGCGCATCACCGTGCTG GTGGCCACCGACGTGGCGGGGCGGGGCATTCATATCGATGGCATCAGCCACGTGATCAACTTCACCCTGCCGGAAGACCCGGACGACTACGTGCACCGCA TTGGCCGGACAGGCCGTGCTGGCACCAGTGGTGTGTCGATCAGCTTTGCCGGTGAGGATGACTCGTACCAGCTGCCAGCGATCGAAGAGCTGCTGGGGCG CAAGATCAAGTGTGAAATGCCGCCGGATGAGCTGCTGAAGCCGGTGCCGCGCAAGCATCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCCACAGGTACTGCACAGCTTTCAAAACCTGTGATGCACCTGTGGGAGCGGGTTCACCCGCGAACCGG GGCTTCGCCCCGGCCATCAAACAAGGATCTACCAGCGCTCCGCCGCATCCTGATCACTCTGTTTCCCTTCCGCCCACCGTGCCCCTTCCTGGGTATTTTC CTTCTTCCAGAACGGCGCCCGCGTCTTCAGATAGTCCATGATGAAGTTGCAGGCATCGAACGCCGCCTGCCGATGGGCACTGGCCACGCCGACGAACACG ATCGGCTCACCCGGCTCGAGCGCACCGATGCGGTGCAGCACCTCCACCTTGAGCAACGGCCAGCGCTGCTCTGCCTCCACCACGATCTTGGCCAAGGCCT TTTCGGTCATGCCCGGATAGTGCTCGAGGAACATCCCCGCCACCTCGCGGCCATCGTTGAAATCCCGCACGTAGCCGACAAAACCGACCACCGCGCCCAC
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| Amino Acid Sequence |
>RNA helicase
MLKALKKIFGKGDAAPQAVAPAASVTPPAPAPASEARPAEKPAAPRATPTPQAEQPAAVTPAADKPAKDKPRRERKPKPQASLWKSEDFVVEPQEGKTRF HDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAIALTKYT GLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAK QWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLENFREGRITVL VATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEELLGRKIKCEMPPDELLKPVPRKHH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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