Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCAACCCGACGATCCCGGCCTGGTTCGATGACCTGCATCAGGCTGGCATCCCTGCCGAGTGGACGGTGGATATCCTTACCCGTCTGTGGCGCAAGCTGG CACTCAATTGCGCCATCAACCCGCTGACCGTGCTGCACGACTGCCAGAACGGCGGGCTGCTGGGGCACCTGGGCGAAGTGGATGCGCTGTGCGCCGAGCT GGCCCAACTGCTGCGCCGCTGTGGCCAGCCAGAAGCGGCAGACGGGCTGAACGAGGAAGTGCAGCGGGTGATCCTCGCCACTGCGGCCAACTACTCTTCC ATGTACCAGGATGTACGCGCAGGCCGCCGCACCGAGGTGCACTACCTGCTTGGCCATGCCTGCCGCACCGCCGGCCGTCATGGCCTACAGCTGCCAGAGC TGGAACGCCTGCTGCAGCACCTGGTCGATAACCTGCGTGTGCGTGGTTTGCCCTGCGACTGACGCAGCCCTTTCAACCGGATACGGACATTGCCTAGCCC
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DNA Sequence for Gene |
>X970_21015
ATGACCTTGCGCCAACGCCTGGAAAACCTCCCGGTCGGGCAGAAGCTGCTGGCAGCCCTGCTGGTGTTGCTGGTGACCATCCTGTTGGTGGCCAACCTCA CCTTCATCAGCGCCGCCTACTGGATCACCCAGGAAAGCATGGCGCCACAGGCGCTGCACACCATCGGCCGGCTGGTGGCCAACCCGCAACTGGCGGCGCG CGCCGGCGATACACCGGACACCGCCAGCGCCCTGCTGAAAGAGCTGGACAGCTACACGCCGCTGCGCGCCGCTGCCGTCTACGGTGGCGATGGCCGCATG TTGGCGCAGCTGCAGCACGGCGAGCCGCTGGCACTGCCCAAGCGTTTTCGCAACATCGACGGCTGGCGCCTGATGGAGTTTCGCAGCACCCAGCTGATCC GCATGCCACGTGACGCCAACCCGCCCGCACACCTGCTGCTGGTGGCCAGCAGTGAACTGCCCACGGCTTTCTATACCGGCACCCTCAGCGCCAGCCTGGG CATCCTGGTGTTCAGCATCCTGCTGTGGATCGTCATCGCCCGACAGATAAAACGCCTGATCACCCAGCCGATCAACCAGCTCGAAGAGCTCAGCCGCCAG GTCACCCGCGAAGAGAGCTATGCCTTGCGCGCGCAGCGCGGTAACGACGACGAAATCGGCAGCCTGGCCGAAGCGTTCAACACCATGCTCTCGCGCATCG AAGCCCGCGAACAGCAACTCAAGCGCACCCGCGACGAGTTTCAGGAGGCCTACGACCAGGCCCAGGGCCTGGCCGAGGAAACCCGCCACACCAACCGCAA GCTGGAACTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAAAAACTCACCGGCTTCCAGAACTACCTCAACAGCATCATCGACTCGATGCCCTCGGCGCTG ATCGCCCTGGATGAACAGCTCTACGTGACCCAGTGGAACCACGAAGCCACGGTACTTTCCGGCACGCCTCTGGACGAGGCGCTGAACCAGCCGATCTTCA TTGCCTTCGAACCGCTCAAGCCGTTCCTGCCGCAACTGAAGGAAACAGTGGAAAAGCACCGGGTGGCAAAGATCGAGCGGGTCACCTGGCCCAAGGGTGA CGACCTGCGCCACTACGCCCTGACCTTCTACCCGCTGACCGGTGGCGGCGGCCGTGGCGTTGTCATCCGTATCGACGACATCACCCAGCGCCTGTCGCTG GAAGAAATGATGGTGCAATCGGAAAAGATGCTTTCGGTCGGCGGCCTGGCCGCCGGCATGGCCCACGAGATCAACAACCCGCTGGGCGCGATCCTGCATA ACGTGCAGAACATCCGCCGGCGCCTGTCACCAGAACTGCCGCGCAATCAGGAACAGGCAGAGGAACTGGGCATCGACCTGCCCACGGTCAACCGCTACCT GGAGAGCCGCGAAGTGCCGCAATTGCTCGACGGCATCCAGCAGGCCGGTGCCCGGGCAGCGAAGATCGTCACCCACATGCTCAGCTTCAGCCGCCGCAGC AACCGTCAGCTGGCGCCGTGCGACCTGCCGGCGCTGATCGATCAGGCGGTGGAAATTGCCAGCAACGACTTCGACCTGGCCATAGGCTTCGATTTCAAGG GCCAGGCCATCGTGCGTCAGTTCGACCCCGACCTGGGGCCGGTGCCGTGCACCGCCAACGAATTGGAGCAGGTGCTGCTCAACCTGCTGAAAAACGCGGC CCAGGCCATCCACCAGCGGCCACAGCCGAGCGAGCCCGGGCGCATCACCCTGCGCACCCGCTTGAGCCCGCCATGGGCGGAAATCCAGGTCGAGGACAAC GGCGTCGGCATGCCCGAAGGGGTGCGCAAGCGCACCTTCGAGCCGTTCTTCACCACCAAGGAAATCGGCCAGGGTACCGGGCTGGGGCTGTCGGTCTCGT ACTTCATCATCACCAACAACCACAAGGGGCAGATGGAAGTGCAGTCCACGCCCGGCCAGGGCACCTGCTTCACCCTGCGCCTGCCCCTTGGCCAGCCGGC AGCGGTGGCGCCGGCCAAAATGGAGAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATGGGCTACCGCCTGTCGAAGATCTACACCCGCACCGGCGACAAAGGCGAAACCGGCCTGGGCGACGGGCGCCGAGTGCCCAAGGACCACCCGCGAATC GAGGCGATTGGCGAGGTGGACAGCCTGAACAGCCAGCTGGGTTTGCTGCTGGCGGGGCTGGCCGAACAAGGGCTGGATGAAGTGAGCGCGGTGTTGGCGC CGTGTCAGCACCGCCTGTTCGACCTGGGCGGTGAGCTGGCGATGCCCAGTTATCAGGCGTTGGACCTGGCGGAGGTGGAGCGGCTTGAGGCAGCGATCGA TGTGTGGAATGAAGAGCTGGGGCCGTTGAAAAACTTCATCTTGCCCAGTGGCTCGGCGCTGGTGGCACAGGCGCATGTGTGCCGGAGCCTGGCGCGCAGT GCGGAGCGGCGGTGCCAGCAGCTGAATGCGCTGGAGCCGTTGGCGGGGGTTGGGTTGGCGTATATCAACCGGCTTTCGGATCTACTGTTCGTGGCCGCGC
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Amino Acid Sequence |
>sensor histidine kinase
MTLRQRLENLPVGQKLLAALLVLLVTILLVANLTFISAAYWITQESMAPQALHTIGRLVANPQLAARAGDTPDTASALLKELDSYTPLRAAAVYGGDGRM LAQLQHGEPLALPKRFRNIDGWRLMEFRSTQLIRMPRDANPPAHLLLVASSELPTAFYTGTLSASLGILVFSILLWIVIARQIKRLITQPINQLEELSRQ VTREESYALRAQRGNDDEIGSLAEAFNTMLSRIEAREQQLKRTRDEFQEAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNHEATVLSGTPLDEALNQPIFIAFEPLKPFLPQLKETVEKHRVAKIERVTWPKGDDLRHYALTFYPLTGGGGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPRNQEQAEELGIDLPTVNRYLESREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQLAPCDLPALIDQAVEIASNDFDLAIGFDFKGQAIVRQFDPDLGPVPCTANELEQVLLNLLKNAAQAIHQRPQPSEPGRITLRTRLSPPWAEIQVEDN GVGMPEGVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSTPGQGTCFTLRLPLGQPAAVAPAKMEK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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