Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCTCCAGCGGCCCGTTCCCCTTCCCCTTCGACGAACCTGGCAAGTACGAGATCAGCAAGCACGCCAACACCTATGGCCCCAAGGACGGGCATACCTTCA CCGCCCCGGTGGGCAGCTACCCGCCCAATGCCTTCGGCATGTACGACATGCACGGCAACGTCTACGAATGGGTCGCCGACTGCTACCACGACAGCTACGA AGGCGCCCCCACCGACGGCAGTGCCTGGATCCAGGACCCCAAGTGCATCCGCGCGCACATGCGCGGCAACGACTGGGGCGAGCCGCCGATCTTCTCCCGC TCGGCCAACCGCAACGACCGCCTCAAGACCACCCGCGGTGACTTCCTCGGCTTTCGCGTAGCACGCGAACTGTGAAGTTGTGACGCGGTTAACGCAGCAT CGGCCAAAAAAATCGCCAATAAGAATCGTTCCGGTTTTTCGCAGGTGCTGCGTCCTATAGCTGACAAAGAAAAATCCCTCTGCCAACGAGACCGCAATAG
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DNA Sequence for Gene |
>X970_18745
ATGTCCAAGTCCCTCCCCGGCTCGCTCAACCCGCTTGCCAAAGCACTACTGATCCGTCATTCCCTTCGTCCCCAGCGCGCGTTCACACGCATCGGCCTGG GCCTGGCGATATCCGCTGCGATGGTTGCCCAGGTGCAGGCGCAGGAGTGGACACTGGATATTCCCGCGCAGTCGATGAACTCGGCGTTGCAGGCACTGGC CAGGCAGACCGATACCCAGTTGCTGTACAGCCCGGAAGATATCGGTGGCCTGCGCTCCTCCGCACTCAAAGGGCGCCACGATCTCGCTTCGTCCCTGCGC ATCCTGCTGGGCGGCAGCGGGCTGCGTTATCAAATCGACGGCAACACCGTGACGGTAACAGCGGGTTCAGCCGCAAAGGACGGCCAGGTCGAGCTTTCGG CGACCAACGTCAATAGCGTGGGCCTGGGGGCCACTACCGAAGGCACGGGTTCCTACACCACCGGCGTGACCAGCACGGCCACCCGCATGAACCTGTCGAT ACGCGAAACACCGCAAAGCATCAGCGTCATCACCCGCCAGCAAATGGACGACCAGCACCTGGCGACCATTACTGACGTACTGAAGCAGAACCCGGGCATC ACCATGTCCCAGGACGGTGGCGAGCGCTTTCACATCTATTCGCGCGGCTCGGAAATCAGTACCTACCAGCTCGATGGCGTGAACACCACGCAAGACTACC TGACGCGCAACATGCCCAACACCCTGATGGACATGGCCATGTTCGACCGCATCGAGATCGTCCGCGGTGCCACTGGCCTGATGACCGGTGCGGGCGAGCC CAACGGTGTGGTCAACATGGTACGCAAGCGCCCCACGCGAGAATTCCAGTCGTATGTGCAGGCCGGTGTGGGCTCGTGGGACTACTATCGCACCGAGGCC GACGTGTCCGGCCCGCTGATCGAAAGCGGCAAGCTGCGTGGCCGCCTGGTGGCCGCCAAACAGAGCAACCAGAGCTACATGGACTGGTACAGCCAGGACC GTGACCTGGTCTACGGCGTGCTCGAAGCAGACCTGACCGATACCACCACCGTGCGCTTCGGCATGGACTACCAGACCTACGACGCCAATGGCGCGCCAGG TGTGCCGCTGTTCTTCAGCAATGGCCAGCCCACCAACTTCTCCCGCTCGACCAGTTCCGGGCCGCGCTGGATGTATGAAGACTACACCACCAAGAACTAC TCCTTCGGCCTGGATCAGGAGCTTGGCAATGGTTGGCAGTTGAAAATGGCCGGCAACTACATGGATGTCGATCGCGACTCGCTGTCGGCGTTCTATCGCA CCGGTGCCGGGGTCTCTACCCTCGATCAAGCCACCGGCAACGCCAAGTCCGACCTGCTGCAAGTCGATGCCCACCAGGTTCAGCGGGGCATGAACATCAC GCTGCAGGGGCCTTTCGAGCTGTTTGGCCAGACCCACGAACTGGTTACCGGCTTCGACTACATGGATTACGAGAACAACCACTTCACCGGCAGAGCTGGG GAAGCCACATTCAACTTCTACACCTGGGGCAACCGCATACCGCAACCTGGCAACTATTCGCCACTGCTGGACTACGACCTGACCATCCGCCAGACCGGTT ACTTCATTGCCACCCGGCTCAACTTCACCGACGACCTGCACATGATTCTCGGTGCCCGTACAACCAACTACCGTTCGGACTCGAACCAGGTGGTATTGAC CACTGGCACTGGCAACCCCACGCAACTTAAGGAGCACGGAGAGGTAACACCGTACGCCGGCCTGATCTATGACCTGACCGATGAGCAATCGGTGTACGCC AGCTACACCGATATCTTCAAGCCCCAGACCAGCCGCGACCGTACCGGCAAGGTGCTGGCCCCTGTGATCGGGCAGAACTATGAAATGGGCTGGAAAGGTG AGTTCTACGATGGTCGCCTGAACGCCAACGCGGCGATCTACCTCATCAAGCGCGACAACCTTGCAGAGGAAGACACCGGTTTCAGCGTACCGGGCGTGCC TAACTCCACCGCTTACCGCGCGGTCAGCGGCGCCGAAACCAAGGGCATTGATCTTGAACTGTCCGGCGAAGTGGCTCGCGGGCTTGAGGTTCATACCGGT TACAGCCACTCCCGCACGGAAGATGCCAATGGCGCTCGGCTGACGTCTCAACTGCCGCTGGATACATTCCGCCTGTGGACTACCTACCGCCTGCCCGGCG AATGGGAGCGCCTGACTGTTGGTGGTGGGGTCAACTGGAACTCCCAGCAATCCCTGGCCACCCGCTACAACACGCGCATCACCCAGGAAGACTACGCCGT GGCCAGCCTGATGGCCCGCTACAAGATCAGCGAGCACCTGGCCGCCACGCTGAACGTGGACAACCTGTTCGACAAGAAGTACTACGCAGGCCTGGCCGGC AACTATGGCCACTATGGCGCGCCGAGAAACGCGACGCTGAACCTGCGCTACGATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGCAGAACGAAAAAAGGCGACCCTGGAGGTCGCCTTTTTCATGCCTGCATGGTGTTCGCTTCGGTAGGCGGTCCGTTGTAGGAGCTGCCTTGTGTCGC GAAAGGGCTGCAAGGCAGCCCCGGCAATTCCTGCATCACTGCTGAGCCCCTGGGGCCGCGTTGCGGCCCTTTCGCGACACAAGGCCGCTCCTGCAAAGAG TGAGCAGGTTTACTGGCTGATCGTATCTGCCAGCAACAGCCTGGCAATCATCCCCTCAAGGACATCCACCTGCTCAAGGATGTCATAGTGCCCGGCATCA ACAGCAATGTCCTGGCAGCTACCCGAGATGCCACCCGCGTGCGCGCCCTCCCCCGCCCACCAGCAACTTGCCGCTGCCTCGGTAGACGGTAGCTGGCGCA ATTGACGCGAAAGCGCCTTGAGTTTCATGGCCACGACAAAGGTCTGCGCCAGATCAGCGTTGCCGATTTCGGCATAGGCCGACTGTGCAGCCTGTGCGGC
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Amino Acid Sequence |
>ferric-pseudobactin 358 receptor
MSKSLPGSLNPLAKALLIRHSLRPQRAFTRIGLGLAISAAMVAQVQAQEWTLDIPAQSMNSALQALARQTDTQLLYSPEDIGGLRSSALKGRHDLASSLR ILLGGSGLRYQIDGNTVTVTAGSAAKDGQVELSATNVNSVGLGATTEGTGSYTTGVTSTATRMNLSIRETPQSISVITRQQMDDQHLATITDVLKQNPGI TMSQDGGERFHIYSRGSEISTYQLDGVNTTQDYLTRNMPNTLMDMAMFDRIEIVRGATGLMTGAGEPNGVVNMVRKRPTREFQSYVQAGVGSWDYYRTEA DVSGPLIESGKLRGRLVAAKQSNQSYMDWYSQDRDLVYGVLEADLTDTTTVRFGMDYQTYDANGAPGVPLFFSNGQPTNFSRSTSSGPRWMYEDYTTKNY SFGLDQELGNGWQLKMAGNYMDVDRDSLSAFYRTGAGVSTLDQATGNAKSDLLQVDAHQVQRGMNITLQGPFELFGQTHELVTGFDYMDYENNHFTGRAG EATFNFYTWGNRIPQPGNYSPLLDYDLTIRQTGYFIATRLNFTDDLHMILGARTTNYRSDSNQVVLTTGTGNPTQLKEHGEVTPYAGLIYDLTDEQSVYA SYTDIFKPQTSRDRTGKVLAPVIGQNYEMGWKGEFYDGRLNANAAIYLIKRDNLAEEDTGFSVPGVPNSTAYRAVSGAETKGIDLELSGEVARGLEVHTG YSHSRTEDANGARLTSQLPLDTFRLWTTYRLPGEWERLTVGGGVNWNSQQSLATRYNTRITQEDYAVASLMARYKISEHLAATLNVDNLFDKKYYAGLAG NYGHYGAPRNATLNLRYDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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