Pseudomonas monteilii SB3101, X970_08820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TACCTGGACGAGGCCGTGATGAGTCGGCCCTGGGGGAACAATTCGTGCTGGAGTCACGAACCGCTGCTCAGCATCTTCCATGGCGAAACCCAGGGTGGCG AGAAGATCTTCGTGTTGCTGGAGCGGTTGATGCAGTCGCCCAAGGAGTTCCAGGATGTGCTGGAGTTCCTGTACTTCTGCTTTTGCCTGGGCCTGAAGGG CAAGTACGCCCTGGACCCGAAGTGCGATGAAATCATCAACGCCCTGATTTCGCGGATGCACAAGGTCATTCGTGAACTGCGCGGCCCCACGCCGGAATTC CCGGGCGATCCCTATACCAACGTGGTCCCTCGCCCCCACCGTATGCGGCGTCGGGAATGGCCCTGGTGGAGCCCGTTGGTGATCTCCGCCATCGCCATGG TCTGCGCCTACTGCTACTACAGCTACCGCCTGAGCTTGATCACCGCCGAGGTGCTGGAGTCGCTCAACGGCATTTTGCAGCAGTAGCAAAGGGGATCCGC
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| DNA Sequence for Gene |
>X970_08820
ATGCCTAGCCAATCCGACTTGCGCTTCACCTTCCAGCCGCTGGCTGGCCAGATTGACTTCGAGGTGGTTTCGTTCGAACTCGACGAAATGATCAGCTCAC CGTTCCAGCTGAAACTGGAATTGATCAGTTTTGAAGACGAGGTCGACTTCGGCCAGTTGCTCGACCAACCAGTGCTGTTCACGATCTGGCGCGGTGAGCG CCCCCTGCGCTATGTGCACGGCCTGGTCAGCAGTTTCAGCCAGGGTGAGACGGGGTTCTATCGCACCCGTTACCGCGCATTGGTCGAGCCCGTGCTGGCC CGTGCCTGCTTGCGTTCGAACTGGCGCATCTTCCAGCAGAAGACCGTGCCGCAGATTCTCGAATTGATGCTCAGGCGCCAGGGCATTGCCCGTTTCGAAA TCAACAGCATGGGCGAGCATCAGGTGCGCGAGTTCTGCGTACAGGCCGGTGAAACGGACCTCGACTTCATCGCCCGCCTGGCGGGGGAAGAGGGTTTCGT CTATCGCTTCGAGCACACACCGAAACACCATCAGCTGGTCATCACCGACCGACTGCTGGCGCTGGGGCAGATCAGCCGAAGCGCGCTCAAGGCCGACGAC GAGGATGAAGACTTCTTCGACGAAGACGACATCGGCCCCGACCAGGTGCTGTACCGTGCCAACAGCGGTGGCGACCAGGCCAGGCCTTGTCTGCGCCGCC TGCGTTACAGCGAACAGGTGCGCACTGCACGTCAGGTGCAGCGGGACTACACCTTCACCAACCCGCAGTACCGGCAGGAACACCGCGCAGGTGACAGTAG CATCACCCATCAGTCCCGGGACTATGAGCGCTTCGACTACCCCGGCCGCTACAAGCGCGATGCGGTCGGTGTACCCTTTACCACTACCCGCCTGACGGCC CTGCGCCATGACGCCCGTATTGCCGAAGTCGAGGGTGACGATGTGCGGCTGCAACCGGGGCTGAGCTTTACCCTCATCGAACACCCGCGCAAAGACCTCA ACGCTCATTGGCGTGTGATGCGTGTACGTCACGAGGGCAGCCAGTTCACCAGCCTGCAGGAAGAAGCTGCCGGGGCCGAACAAGGAACGCGCTACTCGCA GGAAGCCGTGCTGGTGCCCGGCCGGATCGAATGGCGTCCGGCGCCACTGCCCAAGCCACGCATCGACGGCCCGCACATGGCCACGGTCGTCGGGCCGCCC GGGGAAGAGATCTACTGCGACGAGTGGGGCCGGGTCAAGGTGAGCTTCCCCTGGGACCGGGAGAGCGAGAACAACGAGTTCAGCTCCTGCTGGGTGCGCG TGTCGCAAGGCTGGGCCGGCGGTAGCTGGGGTTCGATGGCTATCCCGCGCATCGGCCAGGACGTGATCATCCAGTACGTCAACGCCGACCCCGACCAGCC GATGATCACCGGGCGTACCTATTGCGGCGACCAACTGCCGCCGTATGACCTGCCCGAACACAAGACCCGCATGACCATCAAGAGCCAGACCCACAAAGGC GATGGTTTCAACGAGCTGCGCTTCGAGGACGAACTCGGCAAGGAAGAAGTGTTCATCCATGCCCAGCGGGACCAGAACAATGTAGTCGGCAATGATGAGA CCACGCGTGTGGGGCGTAATCGTGTCGAGCAGGTCGGCAATGATGAGCACTTGAATATCGGCAATGACTTCCGCCAGGAAACCGGGGGTGACCATACCCA GCTCATTGGGCAAACCTGCCACGTAGACATCAAGCAGGACCTGATCGAGAAGATAGGCAACGACCGTAGCGAATCAACAGGGGCCAATCACCGGGCCCTT GTCGGGAAAGACGCCGAGCTGGTCGTCAAAGGTACGCAAAAGGTCACCGTCGGGCAGGGCATCGAGCAACATACGACGATCTATCAGCTGCGCGCCAGTG AGCGCATCGAGTTCAGAACCGCGGGCGGCAGCATTGTGCTGGACGGGCAGGGCATCACTATCAACGGGCTGAAGCTCGAGCTGTTGGGGCAAACCAGCGC GGCTGCGTCAGGGACTGGAAACAGCCAGCCACTTACGCTTGCGCCTGACGCCAGCAACAAGTGCGAGGCCAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGCACTGACAACCTGGCGAGGCTCATCGAAAGCCATCATGGGGCGCACTTGTACTGCCATGTGCTGATAGATCCGCTTGCGACTGCTCACGATGGCGA CCACGCCGTGCTTGCCCCGCTGCGCAATGCCCTGGGTGAGCAGGCATTGACCCGTGTGCACCGGGCCGACCTGGCCCATGCCCCCCAACTGCATCCCGTA CTGGTCTGCTTGGCTTCGCCCGGCATGGTCCCCAGTCGCCGTCTGCTGGAACTGACCGCCCGAGCGGCGCAGAGGGCGTTGTTTCAGCAACGGCGTTACC TGTGTGGCTGGCTGTTCAGTGAGGCGCCTTCGGCCACTGTCGCGTCCCATCTCACGGCCTTGTGTCGGCTACCCGATTCCAATCGGGAATTTGGCTGCTA CCCGGTCTACGAACCCGTCCGGCTGGAGTTGCTTGCGGCGACGTTCGAGCGGCTTGAACAAGGCCCATGGTGGCCGATCAGTGACTGGTTGTTCCTGAGT
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| Amino Acid Sequence |
>type VI secretion protein VgrG
MPSQSDLRFTFQPLAGQIDFEVVSFELDEMISSPFQLKLELISFEDEVDFGQLLDQPVLFTIWRGERPLRYVHGLVSSFSQGETGFYRTRYRALVEPVLA RACLRSNWRIFQQKTVPQILELMLRRQGIARFEINSMGEHQVREFCVQAGETDLDFIARLAGEEGFVYRFEHTPKHHQLVITDRLLALGQISRSALKADD EDEDFFDEDDIGPDQVLYRANSGGDQARPCLRRLRYSEQVRTARQVQRDYTFTNPQYRQEHRAGDSSITHQSRDYERFDYPGRYKRDAVGVPFTTTRLTA LRHDARIAEVEGDDVRLQPGLSFTLIEHPRKDLNAHWRVMRVRHEGSQFTSLQEEAAGAEQGTRYSQEAVLVPGRIEWRPAPLPKPRIDGPHMATVVGPP GEEIYCDEWGRVKVSFPWDRESENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGDQLPPYDLPEHKTRMTIKSQTHKG DGFNELRFEDELGKEEVFIHAQRDQNNVVGNDETTRVGRNRVEQVGNDEHLNIGNDFRQETGGDHTQLIGQTCHVDIKQDLIEKIGNDRSESTGANHRAL VGKDAELVVKGTQKVTVGQGIEQHTTIYQLRASERIEFRTAGGSIVLDGQGITINGLKLELLGQTSAAASGTGNSQPLTLAPDASNKCEAKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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