Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCACCGAGTAAAAGCCCTTCTTGCGCCACTCGCCCTCGCTGTGGGCGTCGTAGAACAGCCGCGTGGTGGGCACTGCCTTGCTGCGCTCGCCCTGATACA CCGGCACCTTGGTGGCGCCGCGCACCGCGCCTTCGGGGCTTTCCAGCTTCAGCTGGCAGGCTGCGTCGTTGCAGGCGTGGCAGGCCACGCATTTCTCGGT GAAGATCGGTTGAATGTCCCGGGTGTAGGAAATAGCCGGGCTCGACTGGGGGGCTTGCCCGAACGCCACACTGCAGATGAGCAGGGCGAAAACGCCGGCA AGAATACGATGCACCATGTGCGGAAAGTCCTGGGTATTGAAAGCCATCACGATTTGTTGCCTGGTCGTCCTTGGGTGCCCTGCTTTGCCGACGCCCACCC AACATGAGCCATTTTCATGCAAATGGGCGATGCGCCTAAAAACCGCGCAGCTTTGTTATGATTCTGCACCTTCTGAAATTCGCCCGACCAGGTAGTTCCT
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DNA Sequence for Gene |
>X970_07740
|metH
ATGTCCGACCGCAGCGCTCGTCTCCAAGCACTCCAGAACGCACTCAAGGAGCGCATCCTGATCCTCGACGGCGGCATGGGTACTATGATCCAAAGCTACC GGCTCGAGGAACACGACTATCGTGGCACGCGTTTCGCCGATTGGCCAAGCGATGTCAAAGGTAACAACGACCTGTTGCTGCTCAGCCGCCCGGATGTGAT CGCCGCCATCGAAAAGGCCTACCTGGATGCCGGCGCCGATATCCTCGAAACCAACACCTTCAACGCCACGCAGATTTCCCAGGCCGACTACGGCATGGAA TCGCTGGTCTACGAGCTGAACGTCGAGGGCGCGCGCATCGCCCGCCAGGTGGCCGATGCCAAGACCCTGGAAACCCCGCACAAGCCGCGCTTCGTCGCTG GCGTGCTCGGCCCTACCAGCCGCACCTGCTCGATTTCCCCGGACGTCAACGACCCAGGCTACCGCAACGTCACTTTCGATGAGCTGGTAACGAACTACAT CGAGGCCACCCGCGGCCTGATCGAGGGCGGCGCCGACCTGCTGCTGATCGAGACCATCTTCGACACCCTCAACGCCAAGGCGGCGATCTTCGCCGTGCAG CAGGTGTTCGAGGAAGACGGCATCGAACTGCCGATCATGATCTCCGGCACCATCACCGACGCCTCGGGCCGTACCCTGTCGGGCCAGACTACCGAAGCGT TCTGGAACTCGGTACGCCACGCCAAGCCGATTTCCGTGGGCCTGAACTGCGCCCTCGGCGCCAAGGACCTGCGCCCGTACCTGGAAGAGCTGGCGACCAA GGCCGACACCCATGTCTCGGCCCACCCCAACGCCGGCCTGCCAAACGCCTTTGGTGAATACGACGAAACCCCGGCCGAAATGGCCGTGGTGGTCGAGGAA TTCGCCGCCAGCGGCTTCCTCAACATCATCGGCGGCTGCTGCGGCACCACGCCGGGCCACATCCAGGCCATTGCCGAGGCCGTCGCCAAGTACAAGCCGC GCGAGATTCCGGAAATCGCCAAGGCCTGCCGCCTGTCGGGCCTGGAGCCGTTCACCATCGATCGCCAGTCGCTGTTCGTCAACGTCGGCGAGCGCACCAA CATCACGGGCTCTGCCAAGTTCGCCCGGCTGATCCGTGAAGAGAACTACACCGAAGCCCTGGAAGTCGCCCTGCAACAGGTCGAGGCCGGCGCCCAGGTG ATCGACATCAACATGGACGAAGGGATGCTCGATTCCCAGGCTGCCATGGTCCGCTTCCTCAACCTGATCGCCGGCGAGCCGGACATCTCGCGCGTGCCGA TCATGATCGACTCGTCCAAGTGGGAAGTGATCGAAGCGGGCCTCAAGTGCATTCAGGGCAAGGGCATCGTCAACTCCATTTCCATGAAGGAAGGCGTCGA GCAGTTCAAGCACCACGCCCGCCTGTGCAAGCGTTATGGCGCTGCCGTGGTGGTGATGGCCTTTGACGAGGTCGGCCAGGCCGACACGGCCGCGCGCAAG AAAGAGATCTGCCAACGCAGTTACGACATCCTGGTCAATGAAGTGGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATTTTCGCCGTCGCCACCG GCATCGAAGAGCACAACAACTACGCCGTCGATTTCATCGAGGCCTGCGCCTACATCCGCGACCACCTGCCGCACGCCCTGAGCTCGGGCGGTGTGTCCAA CGTGTCGTTCTCGTTCCGTGGCAACAACCCGGTGCGGGAAGCCATCCACTCGGTGTTCCTGTACCACGCGATCCAGAACGGCCTGACCATGGGTATCGTC AACGCCGGCCAGCTGGAGATCTACGACGAGATCCCGCCTGCACTGCGTGAAAAGGTCGAGGACGTGGTGCTCAACCGCACCCCGCATGGCACCGACGCAC TGCTGGCCATTGCCGACGACTACAAGGGCGGCGGCGCAACCAGGGAAGTGGAAAACGAAGAGTGGCGCTCGCTGCCGGTGGAAAAACGCCTGGAGCACGC GCTGGTCAAGGGCATTACCGCGTTCATCGTCGAAGACACCGAGGAATGCCGCCAGCAGTGCGCCCGCCCGATCGAAGTGATCGAAGGCCCGCTGATGAAT GGCATGAACGTGGTCGGCGACCTGTTCGGCGCGGGCAAGATGTTCCTGCCCCAGGTGGTCAAGTCGGCCCGCGTGATGAAACAGGCGGTAGCGCACCTGA TTCCGTTCATCGAAGCCGAGAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTGATGGCCACAGTAAAAGGCGACGTGCACGACATCGGCAAGAACAT CGTCGGCGTGGTGCTGGGCTGCAACGGCTACGACATCGTCGACCTCGGCGTGATGGTGCCGGCCGAGAAGATCCTGCAAACCGCCCGCGACGAGAAGTGC GACATCATCGGCCTGTCCGGCCTGATCACGCCGTCGCTGGACGAGATGGTCCACGTGGCCCGCGAAATGCAGCGCCAGGGCTTCCAGTTGCCGCTGATGA TCGGCGGCGCCACCACCTCCAAGGCGCACACCGCAGTCAAGATCGAGCCCAAGTACAGCAACGACGCCGTGGTCTATGTCACCGACGCCTCGCGCGCGGT AGGTGTTGCCACCCAGTTGCTGTCCAAGGAGCTGAAAGCCGGCTTCGTCGAGAAGACCCGCCAGGAATACGAAGAAGTACGCGAGCGCACCGCCAACCGC AGTGCCCGCACCGAGCGCCTGAGCTACGCCCAGGCTATCGCCGCCAAGCCGCAGTACGACTGGGCTGGCTACCAGCCAGCGGTGCCCTCCTTCACCGGCG TCAAGGTGCTGGAAGACATCGACCTGCGCACGCTGGCCGAGTACATCGACTGGACCCCGTTCTTCATCTCCTGGGACCTGGCCGGCAAGTTCCCGCGCAT CCTCACCGACGAAGTGGTCGGCGAAGCGGCGACGGCGCTTTACAAAGATGCCCGCGAGATGCTCGACAAACTGATCGACGAAAAACTCATCAGCGCCCGC GCAGTGTTCGGCTTCTGGCCGGCCAACCAGGTAGCCGATGACGATATCGAAGTGTACGGCGAGGACGGCCAGGCCCTGGCTACCCTGCACCACCTGCGCC AGCAGACCATCAAGCCGGACGGCAAGCCCAACTGGTCGCTGGCCGACTTCGTCGCGCCGAAGGCCAGTGGCGTTACCGACTACGTGGGCGGTTTCATCAC TACCGCCGGCATCGGTGCCGAGGAAGTGGCCAAGGCCTACCAGGACAAGGGCGACGACTACAGTTCGATCATGGTCAAGGCCCTGGCCGACCGCCTGGCC GAGGCCTGTGCCGAATGGCTGCACGAGCAGGTGCGTAAAGAGCACTGGGGTTATGCCCGCGACGAACACCTCGACAACGAGGCGCTGATCAAGGAGCAGT ACCGCGGTATTCGCCCGGCCCCCGGCTACCCGGCCTGCCCGGACCACACCGAGAAGGAAACCCTGTTCCGCCTGCTTGATGGCACTGCCATCGGTGAGAC CGGGCCGAGCGGCGTGTTCCTCACCGACCACTTTGCGATGTTCCCGGCGGCGGCGGTCAGCGGCTGGTACTTTGCCCACCCGCAGGCGCAGTACTTTGCG GTGGGCAAGGTCGACAAGGACCAGATCGAGCGCTACAGCGCGCGCAAGGGCCAGGATGTGAGCGTCAGCGAGCGCTGGTTGGCGCCTAACCTGGGTTACG ACAGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACCCTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCTACAGGAGAATGCAATCCTTTGTAGGAGCGGCCTTGTGTCGCAATGGGCTGCAC AGCAGCCCCAATAGCCACCTACACTGTCCCTGATTGCCTCTGATTTCCTCAGGAGCCACCATGGACGATTCCAGCCAGGGCAAGCCCCCTACCTTCTGGC AGATGCTGCACAGCATCCTCGCTGCCGCCTTCGGCGTGCAAAGCGGCAAGAACCGCGCCCGCGACTTCACCCACGGCAAGGCCAGCCATTTCATTGCGCT GGGGACGCTGTTCACCCTGGTGTTCATTGCCATACTGATCGGCCTGGTGCAATTGGCCCTGCACCTTGCGCGCTAGCAAAAACGCCTGCGGGACTCCCTC CCGCAGGCGCTCTGGCTGCATCACGGTCTTGAATACAAGTCTACTGGTGGCTGACCCAATACACGGCAGTGACCACCACCAGAACGATCAGGCAGAGGAT
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Amino Acid Sequence |
>B12-dependent methionine synthase
MSDRSARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRPDVIAAIEKAYLDAGADILETNTFNATQISQADYGME SLVYELNVEGARIARQVADAKTLETPHKPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVTNYIEATRGLIEGGADLLLIETIFDTLNAKAAIFAVQ QVFEEDGIELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAVVVEE FAASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFVNVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQV IDINMDEGMLDSQAAMVRFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYGAAVVVMAFDEVGQADTAARK KEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIV NAGQLEIYDEIPPALREKVEDVVLNRTPHGTDALLAIADDYKGGGATREVENEEWRSLPVEKRLEHALVKGITAFIVEDTEECRQQCARPIEVIEGPLMN GMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQTARDEKC DIIGLSGLITPSLDEMVHVAREMQRQGFQLPLMIGGATTSKAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVEKTRQEYEEVRERTANR SARTERLSYAQAIAAKPQYDWAGYQPAVPSFTGVKVLEDIDLRTLAEYIDWTPFFISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISAR AVFGFWPANQVADDDIEVYGEDGQALATLHHLRQQTIKPDGKPNWSLADFVAPKASGVTDYVGGFITTAGIGAEEVAKAYQDKGDDYSSIMVKALADRLA EACAEWLHEQVRKEHWGYARDEHLDNEALIKEQYRGIRPAPGYPACPDHTEKETLFRLLDGTAIGETGPSGVFLTDHFAMFPAAAVSGWYFAHPQAQYFA VGKVDKDQIERYSARKGQDVSVSERWLAPNLGYDS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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