Pseudomonas monteilii SB3101, X970_04970 (ihfB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCACCGGCTGCGCCGGTGTTCGCGGGTAAACCCGCTCCCACCTGGGTGGCGCAGGCATACAAGGCATGCACGATCCCTGTAGGAGATCCCCTAGCTCTTT AGGCTGCGCTGTCACGCAAAGAACAAAGTCTGTAAGCGCGCCGCGGACCCTGTGGGAGCGGGTTTACCCGCGAAGCAGGCGCCGCGGTGTATGGCACCGG CTGCGCCGGTGTTCGCGGGTAAACCCGCTCCCACCTGAGTGGCGCAGACATGGAACGCATGTGGCATCTCTGCGGTGCAGCGCTCTTGCCCAGGCTTCCA AAAAGCTTACACGATACCTGTGGCAGCCGGCTTGCCGGCGATGAGGCCGGCCCTGCCAACCCAATCCAGCTAGACCATTCTTGAAAAACTTCAATCTTGA ATTTTTTTATTAAGTCAAGAACCGCCCTGTTCAAATCCTTCCCAGCGTGCTACAAACTGGTTAAGCAATGATCTAGCTGCTTGATAACGAAGGGAAAAAT
|
|
| DNA Sequence for Gene |
>X970_04970
|ihfB
ATGACGAAGTCGGAGCTGATCGAACGTATTGTCACCCATCAGGGGCTGCTCTCGTCCAAGGACGTGGAGCTGGCCATCAAGACCATGCTTGAGCAGATGT CACAATGCCTTGCCACTGGCGATCGCATCGAGATCCGCGGTTTTGGCAGCTTCTCGCTGCACTATCGCGCACCGCGTGTCGGCCGTAACCCGAAGACCGG CCAGTCGGTCAGCCTCGAAGGCAAGTTCGTGCCGCACTTCAAGCCCGGCAAGGAGTTGCGCGACCGGGTCAATGAAGAAGATGAGGTCCACACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCCACAAGGAGCAATCTGATGCGTAACCTCAAGCGCGCCCTGGCGGCGGTATTCGTGCTGCTGTTGGCGGCTGTGGTGCTGTTCTTCGTGCTGGAGAAC CAGCAAGCCGTCTCGTTGGTCCTGTTCGGCTGGGCCGCACCGGCCATGCCGGTCGCAGTACTGGTGCTGGCCGCCCTGGTCATTGGCCTGGCAGTCGGGC CGTTGCTGGGTGCCTACGGCGTGCAGCGCAGCAAACGCAAGATCAGGGCTTCTGCCCGCCAGGCAGCACTGAGCGGTAATTAAGGGCTTTTCCTACAGCT GCTTGGGAAAGTCTCACCTATGCTTGCGTCGGTGGCCATGGAGTAATAGCGCACTTCATTTTCGGCTCAGACGAGTGAGTGCAGCATGGAATATCCCAGC CTTTCCCATCACGGTGGTACCCGCGGCGTTACCGGGTCCTGCCACCAACTGCACCTCGACCCGTCCACCAGCCTGTTGGTCGACTGCGGCCTGGAGCAGG
|
|
| Amino Acid Sequence |
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLEGKFVPHFKPGKELRDRVNEEDEVHT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|