Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACGGGTCGGGCACGTGCTCGAGCATTTCCAGGCAGGTGACCACGTCGAACTGTTCGGGCATTTCCTCGGCCAGGGCTTCGGCGGTGATCTGCCGGTATT CCACCTGCACGCCCGACTCCAGCTGGTGCAGCTGGGCCACGGCCAGTGGCGCCTCGCCCATGTCGATGCCGGTGACCGTGGCGCCGCGCAGGGCCATCGC CTCGCTGAGGATGCCGCCGCCGCAACCCACGTCCAGCACCTTCTTGCCGGCGAGGCTGACGCGCTCGTCGATCCAGTTGACGCGCAGCGGGTTGATTTCG TGCAGCGGCTTGAACTCGCTTTCGCGGTCCCACCAGCGGTGGGCCAGCGCTTCGAACTTGGCGATTTCGGCGCGGTCGACGTTGCTCATTAGAACAGTCC TCTGAAACTTCGCAAAATTGCGCCGGAGTATACCCGAGCGCTCGGCCCCGAGGGTCGCTATAATCGCCGGCTTTTGATATCCGAACGACGGGGAGAGGCG
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DNA Sequence for Gene |
>X970_04935
ATGCGCGAGCGACTTTTGGCGGCGGAGAAGGTGACCGGGATCCGCTGGCAGGGCGGCGTCCTGCACCTGCTCGACCAGCGCCTGCTGCCGTCGGAAGAGC GCTGGCTGGCCTGCGACAATGTCGCGCAGGTTGCAGCGGCGATCCGCGACATGGCCGTGCGCGGCGCCTCGGCCATCGGCATTGCCGCGGCCTATGGCCT GGTGCTGGCCCTTGAGGAGCGGCTGGCCGAGGGCGGCGACTGGGAAATGGACCTGGAGGAAGACTTCCTTGTCCTGGCTGAAGCGCGCCCTACCGCCGCC AACCTGTTCTGGGCGCTGAACCGCATGCGTGAGCGCCTGCAGCGCCTGCGTCCGGACGAAGACGTGCTGGCGGCACTGGAGGCCGAGGCGGTGGCCATCC ACGAGAGCGATCGCGAGGCCAACCTGACCATGGCCCAGTACGGTATCGAGCTGATTCGTCGCCACCAGGGCAACGCCCAGACCCTGCTCACCTATGGCAA TGCCGGTGCTCTGGCCTGTGGTGGTTTCGGTACCGCGCTGGGGGTGATCCGTGCCGGTTACCTGGAGGGCATGGTCGAGCGTGTATACGCCGGCGAGACC CGCCCTTGGCTGCATGGTTCGCGCCTGACTGCCTGGGAACTGGCCAACGAAGGCATCCCGGTGACCCTGTGCGCCGACTCGGCGCTGGCCCACCTGATGA AAAGCAAGGGCATCACCTGGGTGGTGGTGGGCGCGGACTGCATCGCCGCCAACGGTGACGTGGCCAGCAAGATCGGCACCTATCAGCTGGCGGTCAGCGC CATGCACCACGGCGTACGTTTCATGGTGGTGGCGCCGAGCACCAGCATCGACCTGAACCTGGCCACGGGCGAGGACATCCCGCTGGAAGAGCGCGCTGCC GACGAGTTGCTGGACATTGGCGGCACCCGCGTGGCGCCGGATGTCGAGGTGTTCAACCCGGTATTCGACGTGACCCCTGCCGACCTGATCGACGTGATCG TGACCGAGCGCGGCATCGTCGAGCGGCCGGATGCCGCCAAGCTGGCGCAATTGATCTGCCGCAAGCGCCTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGAAACCTCGCTGGCTTCTTCGCGGGCGCGCCCGCTCCCACAGGGACACCACCACTCTCGAGTGTTGCGAGATCCCTGTGGGAGCGGGCGTGCCCGCG AAGAAGCCAGTGAAAATCCGAAGATTCAACCTCGTGTGAGGCCACCTGCCACATCTCCCCACCGCCCCTGCCTTTGTGATAACATCCGGCAGTTTCCAAG ACCGCCCACCACGGCGGCCTTCATTGCGCAGATCCATGGCACAACTCATTGATTTGTCGTAAGTCGTCGCACCCTTATGCGCTGCGGCGGCGAGCTTCGT TCGGCCCTTGATGGAGCTGCGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGA ACTGAGACAGTCTTACCTCGACTACGCGATGAGCGTGATTGTCGGGCGAGCGCTGCCCGATGCGCGTGACGGCTTGAAGCCCGTGCATCGTCGCGTTCTC
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Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAEKVTGIRWQGGVLHLLDQRLLPSEERWLACDNVAQVAAAIRDMAVRGASAIGIAAAYGLVLALEERLAEGGDWEMDLEEDFLVLAEARPTAA NLFWALNRMRERLQRLRPDEDVLAALEAEAVAIHESDREANLTMAQYGIELIRRHQGNAQTLLTYGNAGALACGGFGTALGVIRAGYLEGMVERVYAGET RPWLHGSRLTAWELANEGIPVTLCADSALAHLMKSKGITWVVVGADCIAANGDVASKIGTYQLAVSAMHHGVRFMVVAPSTSIDLNLATGEDIPLEERAA DELLDIGGTRVAPDVEVFNPVFDVTPADLIDVIVTERGIVERPDAAKLAQLICRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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