Pseudomonas aeruginosa LES431, T223_26315 (carB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006807	nitrogen compound metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01369	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02786	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
MetaCyc		L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
MetaCyc		L-arginine biosynthesis IV (archaebacteria)	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
KEGG	pael00250	Alanine, aspartate and glutamate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
MetaCyc		UMP biosynthesis II	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
KEGG	pael01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pael00240	Pyrimidine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
MetaCyc		UMP biosynthesis III	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
MetaCyc		UMP biosynthesis I	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.30.470.20	-	-	-	665	935	4.6E-119
Gene3D	G3DSA:3.30.470.20	-	-	-	119	403	0.0
PANTHER	PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	-	-	6	1061	0.0
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	239	256	4.0E-66
Pfam	PF02142	MGS-like domain	IPR011607	Methylglyoxal synthase-like domain	958	1041	2.0E-19
CDD	cd01424	MGS_CPS_II	IPR033937	Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain	942	1051	9.60135E-50
SUPERFAMILY	SSF56059	Glutathione synthetase ATP-binding domain-like	-	-	128	401	1.94E-109
Hamap	MF_01210_A	Carbamoyl-phosphate synthase large chain [carB].	IPR006275	Carbamoyl-phosphate synthase, large subunit	5	1067	13.396746
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	48	58	4.0E-66
SUPERFAMILY	SSF52440	PreATP-grasp domain	IPR016185	Pre-ATP-grasp domain superfamily	557	675	2.3E-49
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	297	326	4.0E-66
FunFam	G3DSA:3.40.50.20:FF:000003	Carbamoyl-phosphate synthase large chain	-	-	554	662	1.2E-63
Gene3D	G3DSA:3.40.50.20	-	-	-	554	662	5.6E-51
Pfam	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	128	334	1.6E-72
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	19	33	4.0E-66
SMART	SM00851	MGS_2a	IPR011607	Methylglyoxal synthase-like domain	955	1041	2.7E-32
Pfam	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	673	875	1.1E-32
SUPERFAMILY	SSF52335	Methylglyoxal synthase-like	IPR036914	Methylglyoxal synthase-like domain superfamily	938	1069	1.01E-39
SUPERFAMILY	SSF56059	Glutathione synthetase ATP-binding domain-like	-	-	673	933	6.89E-102
FunFam	G3DSA:3.30.470.20:FF:000013	Carbamoyl-phosphate synthase large chain	-	-	665	935	0.0
FunFam	G3DSA:3.40.50.1380:FF:000004	Carbamoyl-phosphate synthase large chain	-	-	936	1072	2.5E-63
Hamap	MF_01210_B	Carbamoyl-phosphate synthase large chain [carB].	IPR006275	Carbamoyl-phosphate synthase, large subunit	1	1062	13.122935
SUPERFAMILY	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain	IPR036897	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	396	554	6.28E-53
FunFam	G3DSA:3.30.470.20:FF:000007	Carbamoyl-phosphate synthase large chain	-	-	119	403	0.0
FunFam	G3DSA:3.40.50.20:FF:000001	Carbamoyl-phosphate synthase large chain	-	-	1	116	2.2E-54
Gene3D	G3DSA:3.40.50.20	-	-	-	1	116	8.7E-49
Pfam	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain	IPR005480	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain	427	505	1.8E-25
FunFam	G3DSA:1.10.1030.10:FF:000002	Carbamoyl-phosphate synthase large chain	-	-	405	553	1.7E-58
Gene3D	G3DSA:1.10.1030.10	-	IPR036897	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	404	553	1.2E-54
NCBIfam	TIGR01369	JCVI: carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit	IPR006275	Carbamoyl-phosphate synthase, large subunit	2	1053	0.0
SMART	SM01096	CPSase_L_D3_2	IPR005480	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain	424	547	6.4E-75
SUPERFAMILY	SSF52440	PreATP-grasp domain	IPR016185	Pre-ATP-grasp domain superfamily	1	127	2.01E-49
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	168	180	4.0E-66
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	204	223	4.0E-66
PRINTS	PR00098	Carbamoyl-phosphate synthase protein CPSase domain signature	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain	380	398	4.0E-66
FunFam	G3DSA:3.30.1490.20:FF:000001	Carbamoyl-phosphate synthase large chain	-	-	686	755	1.3E-26
Gene3D	G3DSA:3.40.50.1380	-	IPR036914	Methylglyoxal synthase-like domain superfamily	936	1072	1.6E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.