Pseudomonas aeruginosa LES431, T223_21160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00086 pac_2 IPR001610 PAC motif 487 529 2.3E-8
SMART SM00086 pac_2 IPR001610 PAC motif 618 660 120.0
Pfam PF08447 PAS fold IPR013655 PAS fold-3 436 523 4.8E-17
SMART SM00052 duf2_2 IPR001633 EAL domain 844 1091 2.3E-76
Pfam PF05231 MASE1 IPR007895 MASE1 3 275 4.1E-16
Gene3D G3DSA:3.30.450.20 PAS domain - - 530 658 5.2E-21
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 285 407 1.5E-25
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 676 832 3.06E-47
SMART SM00091 pas_2 IPR000014 PAS domain 413 481 5.2
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 660 834 2.8E-55
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 843 1100 5.8E-80
CDD cd01949 GGDEF IPR000160 GGDEF domain 673 829 8.29325E-59
Gene3D G3DSA:3.30.450.20 PAS domain - - 282 421 1.1E-23
Gene3D G3DSA:2.10.70.100 - - - 484 529 1.2E-12
CDD cd00130 PAS IPR000014 PAS domain 425 526 5.35843E-8
Coils Coil Coil - - 401 421 -
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 671 828 1.3E-42
Pfam PF08447 PAS fold IPR013655 PAS fold-3 310 392 9.4E-11
SMART SM00091 pas_2 IPR000014 PAS domain 541 610 1.1E-6
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 665 833 8.0E-45
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 421 530 1.29E-16
Pfam PF08448 PAS fold IPR013656 PAS fold-4 549 661 1.2E-11
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 669 831 2.0E-41
CDD cd00130 PAS IPR000014 PAS domain 550 657 5.27791E-7
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 293 404 6.44E-21
SMART SM00091 pas_2 IPR000014 PAS domain 286 352 7.2E-6
Pfam PF00563 EAL domain IPR001633 EAL domain 852 1086 2.1E-60
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 525 654 1.92E-19
SMART SM00267 duf1_3 IPR000160 GGDEF domain 660 832 1.3E-58
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 266 412 0.0
CDD cd00130 PAS IPR000014 PAS domain 295 398 1.73239E-8
SMART SM00086 pac_2 IPR001610 PAC motif 359 401 1.3E-7
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 851 1098 5.75E-74
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 538 667 2.8E-9
Gene3D G3DSA:3.30.450.20 PAS domain - - 424 482 1.2E-14
CDD cd01948 EAL IPR001633 EAL domain 852 1090 9.45185E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.