Pseudomonas aeruginosa LES431, T223_16980
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LES431, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTGAAGAAGGCCGGGATGCCGGCGCCGCCGGCGCGGATCTTCTCGGCCAGCGAGCCTTGCGGGGTCAGTTCGACTTCCAGCTCGCCACTGAGCAGT TGTTGCTCGAACAGGGCGTTCTCGCCGACATAGGAGGCGATCATCTTGCGGATCTGCCGGTCTTCCAGCAGCACGCCGAGGCCGAAACCGTCGACGCCGC AGTTGTTCGAGACCACCGTGAGGTCTCTGACCCCGCGCCGGCGGATTTCCGCGATCAGGTTCTCGGGAATCCCGCAGAGGCCGAAGCCCCCGGCGAGGAC GGTCATGCCGTCGGTCAGGCCTTCGAGGGCCTCTTCGTAACTGCCTACTCGCTTGTCGAGTCCGCTCATGCTGCTGTGCCTCTTCCGGCTCTTGTGATTG TGCGTGCGGCAGTCTGACTGCCGGGTCGCACAGAGCTTCTCCGCTGCGGACTGATTTGTTAAGTTTGTTTTTCCAATCCATTGATGAGAAAAACAAATAA
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| DNA Sequence for Gene |
>T223_16980
ATGACCGTCAAGCAGTTGCGCGCCTTCCTCGCCGTGGCGCAGAGCCTCAGCTTCGCCCAGGCCGGCGAACGCCTGCACCTCTCCCAGCCGGCCCTGAGCC TGGCGATCAAGAGCCTGGAGGAAAGCCTCGGCGGTCCGCTGCTGGAACGTACCACCCGCAGCGTCAGCCTCACCCCCGAGGGCGAGACCCTGCTGCCGCT GGCGCTGCGCCTGCTGGCCGACTGGGACAATACCGAGGAATTGCTGCGCCAGCACTTCACCCTGCAACTGGGCAAGGTCTCCATCGCCGCCATGCCCTCC TTCGCCGGCAACCTGCTGCCGCTGGTCTTGAAGACCTTTCGCGAACGCCACCCGCGGGTCAACGTGGCGGTGCACGACGTGATCAACGAGCAGGTGCTGG AGATGGTCCGCAACCGACGCGTCGAGCTGGGCATCGCCTTCGAGCCGGAGTCCCTGGAAAACCTCGAGTTCACCCCGTTCTACAGCGACCGCTTCGTCGC CGTGGTGCCGACCGGTTCGTCGCTGTCCGGGCAGGAGCGGATCAGTTGGCGCGAACTGCTCGGCGAGCCCTTCATCACCCTGCAACGCCCCTCGGCGGTG CGCCTGCTCCTGGAAGAAAGCGTGGCCGCCGAGCACGGTCGCTTGCCGGTGGCGTTCGAGAGCCACCAATTGGTCACGGTCGGGCGGATGGTCGCCCAGG GACTCGGTGTCAGCGCCGTGCCGACCCTGTGCATCCAGCAGATGCAGGAACTCGGCGCGCGCTGCCTGCCGCTCTACGCGCCGCAGGTGCAGCGACGGGT CGGCCTGCTGCGGCTGAGCGAGCACAAGCTGTCCACCGCCGCCCAGGCCCTCAGCGACGTGCTGCTGCATGGCACCGACTGGCGCTCGCTGGCGCTGCCG CAGGACCAGTCCACGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCAGGCAGCGGCGGGTCCGGTTATGCTTCCTGCATGTCCCGGAACAACAACAAGGACGGACACGCCATGCCCGCACCGCTCTGGAGCCCTTCCGCCGAA CGCATCGCCGCCAGTCGCATGGAGGCCTTCCGACGCTTCGTCAACCAGCGGCACGCCCTCGGCCTGGTCGACTACCCGGCGCTGCATGCCTGGAGCGTGC AGCGGCGCGAGGCGTTCTGGCAGGCCATCGTCGACTTCTTCGAGGTGCGCTTCCAGCAACCGCCGCGTGCGGTCCTCGAGGAAGGCGCGCAGATGCCCTC GGCGCGCTGGTTCCCCGGCGCCACGCTGAATTTCGCCGAACACCTGCTGCGCCGCCGCGATGATGCCCCGGCGCTGATCGCGGTGAGCGAAGACGGTCGC CGCGAGGTGCTCAGCCACGCCGAACTGGCCCGTCACGTGGCGGGCCTGCAGAAGCGCCTCGCCGCCCTGGGCATAGGCCCCGGCGACCGGGTCGCCGCGC
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MTVKQLRAFLAVAQSLSFAQAGERLHLSQPALSLAIKSLEESLGGPLLERTTRSVSLTPEGETLLPLALRLLADWDNTEELLRQHFTLQLGKVSIAAMPS FAGNLLPLVLKTFRERHPRVNVAVHDVINEQVLEMVRNRRVELGIAFEPESLENLEFTPFYSDRFVAVVPTGSSLSGQERISWRELLGEPFITLQRPSAV RLLLEESVAAEHGRLPVAFESHQLVTVGRMVAQGLGVSAVPTLCIQQMQELGARCLPLYAPQVQRRVGLLRLSEHKLSTAAQALSDVLLHGTDWRSLALP QDQSTE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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