Pseudomonas aeruginosa LES431, T223_14850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa LES431, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCAGTCATATCCGTGCTCAGGTGGCGGAGAAACCTGTTCGCCATGGCCTCACGGCGGATGAGCTGATTGGTGTGTTCGAAACCGTGGCGACCTTGCGCA AGCTCTGCTGGGATGCCGCCGAACTCGCAGGGCTCGTTGCCGGGGTTCATTGCTGGTGGGTCGAAGGGCGCGAGGCGGAGGCGCGGCAGTTCCAGGCGCA GATGTCTTTCACCTTGGCGCGAGAAACCTTCTGCCAGGCCGAGCACGACACGATCATGCAGGACGAGCGCCTGTTGCAGGAGCTTGACGAGGCTAGCGAG CGGTCTTTGAAGCAACGTACGTAGCGCGTCGACAAACGAGGGCCGGGCCGGGTTTTACCTACAGGTAAACCCGGCCCGGGTATGTCCGGGGTAACGAAAT ACGACAGTTGAGTTTTTTTTCCGGTTTTTCCTGCTGAGACGTCTTTGTAATTGATAAGTATTCTTAAATATTTATCCATACGAAATATATGGAGAAAAAC
DNA Sequence for Gene
>T223_14850
ATGCCAACAGCACATGCGGTTTCCCCTCTGGCAAGGGCTTTAGGAAGTTTGGGGGCAAACAAGATGTCCAGGCTTGGCCTGGCCCTTCTGCTGGTGAGCG CCCAGGCGGTCGCGCAGGAGTACGAATTCAACGTTCCCGCCCAGCGGCTCGACGCGGCGCTTCAGGCGCTTGGCCGCCAGGCGGGTCTGCAGGTGCTCTA CAACCCGAGCGACCTGAGTGGTCTGCGTAGCCGCAGTGTCAGCGGCAAACTCGAATTGGAACAGGCGATCAGCCAACTGCTGGATGGGGCCAACGGTATC GGTTTCGAACTGCAGGGCAAAACCCTGATCCTGCGCCTGCAGGACTCCTCTTCGGTGATATCCCTGGATTCAATGGTGGTTTCAGGCCTGGCGCTGAATC CCACTACTGAGAACAGCGGCTCCTATGCCTCGCCTGCGGTGTCGATCGGCAAGGGCAACAAGAGCATCAAGGAAATTCCCCAATCGGTGACGGTGGTCAC CCAGAAACGGATGCAGGACCAGAACATGTCCACCGTATCCGATGTCCTGGCCAACGCGCCGGGCGTTACCTCCATCCCGATGTTCGGTACCGGCGAGCAG TACTACTCTCGCGGTTTCTTCATCGAAAACTTCCAGTACGACGGTGTACCCCTGGAGCGCCAATCCTATGCCCGTGGTTCGGACTTCAGCGGGCAGACCG CGATCTTCGATCGGGTAGAGATTCTCCGGGGTGCGCAAGGTCTGCTGGAGGGCGGCGGCAATCCCTCGGGCTCGGTCAACTTCGTGCGCAAGCGACCGAC GGCGGAGAACCAGGTCCGGCTGACTGCCAAGGCCGGCTCCTGGGATCACTATGGTACCCAGGCCGATATCTCCGGCCCGATCGACGAACAGGGAAGACTG CGAGGGCGCCTAGTTCTCGACTACGACACCAAGAACTCGTTCGTCGACCACGTAGGCGATGACCGCCAGACCATCTATGCCGCGCTCGATTACGATCTTA CGGAAGCTACACGCCTCGGCTTCGGCTTCAGTCGCGAGCGGATCGACGCCAACATCGATGTCAACGGCTTGCCCAACTATACCGATGGTTCGATGCCGCA TTTCAGTCGCTCGACTTTCCTCGGCGGCGACTGGTCCTACTGGGACAAGATCCAAGAGACCTTCTACTTCGATATTGCCCACCAGTTCAACGAAGACTGG TCGTTGAATGCCACGGTGGTCAATGCGCGCGAGAAGAACGACTACAAGTACCTGCTGATGGCCGGCAGCATCAATCCGGACAATACCAGTACGCTGCGGG GAGATGCCTACGTCTTCGACTTCTTTTCCGAGCACTGGGGCGGGGATGTCTATGTCAATGGTCGTACCAAGGTTGCCGATCGCCAGCTGAACCTTACATT CGGGGCGAACTATTCGGACCTGGACAGCAGCGATACCTTCGGCTGGAGGCAGCGCTACGTACCCAACTGGGATATCTTCAACTCGCCGGTCAATACCAAC AAACCATCCGATGACGACATCTATTCCGTCAGGCGCAGCGACGATGGCTACGCTTCGATCCAGAAAGGCGTCTACGGCATGGGGCAATACTATCTGACCG ACGACCTGTCCGTAGTGCTCGGGACTCGCATTTCGTCCTACCAGAAGGCTTATACCTCCAATGGGCCTTGGGGTTATTCGAAGGCGGTGGCCAAGGAGTC GGCGAAGGCCATTCCCTATGCCGGCATCATCTACGACCTCAATCCGGAGTGGAGTGCGTATGCCAGCTTCACCAAGATCTTCCTTCCGCAGTCGGTGCGT ACCGCGAGCGGCAGCATCCTGGGACCGAAAAGCGGGAAAAGCGTCGAGACCGGTCTGAAAGGCATCCTCAACGATGGCCGCTTGAATGCCACCTTCGCGC TGTTCCGCATGGAACAGGACAACATCCCGATCCAGGACGCCAACCTGCCCGATGACGTTCAGGAAGCCAACTGCGGCGGTACCTGCTACCACGGCGGCGG CAAGGCTATCAGCCGCGGCTTCGAGACCGAGCTCAGCGGCGAGTTGTTCGACAACGTGCAGGTATATGCCGCCTACACCCTCAACCTGCTGCGTTACCAG GGCGAGGTGCCCAGCGAAGCGGATGACGTTGGCGCCAGCGTCAATACACCGAAGCACATATTCCGCTCCTGGGTCGACTACCGGTTGCCGGGCAATTGGT CGCGGGTATCCGTCGGCGGCGGCGTCAATGCACAGAGCCGGTCGGCCGGGTTCGGCTACTACGGACGGGAGCAGAGCGGCTTCGCGGTATGGAACAGTCG CCTGGCTTATCGCTTCACCGAAGAGCTGACCGGTGCGATGAACGTCAACAACATTTTCGACAGGCGCTACTTCAAGTCCGTCGACTATGGCCACAACTAC TTCGGCGATCCGCGCAACGTGCTGTTCACGCTTACCTATAGCTACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTGCTGACGGCCGGTCATCGGGCCTGCCGGAACGGGAACTGTACGAATGCCGGCCTTCGGGCCGGCTTTTTTCTATCCGTTCGGAATCCGGGTGACGGC CAGCAGGGTTGTTGGCGATTCTCGTCGGCTGGTCCGTGACGAGCACGACGGTGCGTCATTGCCGGCAGTGCAGGCACAAAGATAGAGGCGCGCAGCTAAT GTTGGGCGACTGGGCGACTGGGCGACTGGGCGGCGGCGATGTCTTCAGCACGCTTCGCAGTAGAAGAGAGGGAGTCGAGAGACGCAGAGACGGGCTGGCT GAGCGGGCGATACGACGTGTGGAAAGGCGGTTTGTCGGGGTGAGCTTCGCTGCTGCCTCACCGCGAGGCGGGAAGGGCGGACGGGACGCCATGGTGTCCC GTCAGGCTGATGTCTATCAGGCGGGGTGCAGCGCGGGTTCCACAATCTGGCCGGCGTGCATATGTACCAATTTGTCGGCGATGTCGAAGTAACGGTCGTC
Amino Acid Sequence
>ligand-gated channel protein
MPTAHAVSPLARALGSLGANKMSRLGLALLLVSAQAVAQEYEFNVPAQRLDAALQALGRQAGLQVLYNPSDLSGLRSRSVSGKLELEQAISQLLDGANGI GFELQGKTLILRLQDSSSVISLDSMVVSGLALNPTTENSGSYASPAVSIGKGNKSIKEIPQSVTVVTQKRMQDQNMSTVSDVLANAPGVTSIPMFGTGEQ YYSRGFFIENFQYDGVPLERQSYARGSDFSGQTAIFDRVEILRGAQGLLEGGGNPSGSVNFVRKRPTAENQVRLTAKAGSWDHYGTQADISGPIDEQGRL RGRLVLDYDTKNSFVDHVGDDRQTIYAALDYDLTEATRLGFGFSRERIDANIDVNGLPNYTDGSMPHFSRSTFLGGDWSYWDKIQETFYFDIAHQFNEDW SLNATVVNAREKNDYKYLLMAGSINPDNTSTLRGDAYVFDFFSEHWGGDVYVNGRTKVADRQLNLTFGANYSDLDSSDTFGWRQRYVPNWDIFNSPVNTN KPSDDDIYSVRRSDDGYASIQKGVYGMGQYYLTDDLSVVLGTRISSYQKAYTSNGPWGYSKAVAKESAKAIPYAGIIYDLNPEWSAYASFTKIFLPQSVR TASGSILGPKSGKSVETGLKGILNDGRLNATFALFRMEQDNIPIQDANLPDDVQEANCGGTCYHGGGKAISRGFETELSGELFDNVQVYAAYTLNLLRYQ GEVPSEADDVGASVNTPKHIFRSWVDYRLPGNWSRVSVGGGVNAQSRSAGFGYYGREQSGFAVWNSRLAYRFTEELTGAMNVNNIFDRRYFKSVDYGHNY FGDPRNVLFTLTYSY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site