Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACGGTGGCGTCGGTCGCCAGTACCAGGGTGGTGAGCAGGTCATCGGCGATGCCCTGGGCCAGGCGGGCGATCAGGTCGGCGGTGGCCGGGGCGATCAGT ACCAGGTCGGCCCATTTGGCCAGCTCGATATGGCCCATGGCGGCTTCGGCTGCCGGGTCCAGCAGGTCCAGGTGAACCGGGTGGCCGGACAAGGCCTGCA TGGTCAGTGGGGTGATGAACTCACTGCCACCGCGGGTCATGACCACGCGCACTTCGGCGCCCTGGTCAAGGAGCCTGCGAACCAGCTCTGCGCTCTTGTA GGCGGCAATGCCGCCGCCGACGCCGAGAACGATGCGTTTCCGATACAGACGCTGCATTGGTTTGCCTTTCCAGTTCAGTGAAGCCAGTTCAGTGACGCCT GCGATGCCCCCTCCCCAGGTGAAATCGCACGCAAAAAAGAGGGCCTACGATAACACAGCGCCTGCCAGGCAACAGCGGCGCACGTATACAGGAAAGAGGG
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DNA Sequence for Gene |
>U771_30905
ATGAGTATTCGCGATTGGCCCGTAGCGGAACGTCCGCGGGAGAAACTTCTGGAATGGGGCGCGGCGAGTCTGTCCGATGCCGAGTTGTTGGCCATCTTCC TGCGCACCGGGGTTTCCGGGCGAAGTGCGGTGGACCTCGCACGCCACCTGTTGGTGCAATTCGGTGGCCTGCGCCCGCTGCTGGAGGCCAGCCAGGCGCT GTTCAGCCAGCAACTGGGGCTGGGGCCGGCGAAGTTTGCCCAGTTGCAGGCGGTGCTGGAAATGTCCCGGCGCCACTTGGCCGAGCGGTTGCGGAGTGAC TCCGTATTGGAAAGCCCGGTGGCCGTGCGTGATTACCTCAAGGCGTTGCTGCGCCATGAGCCCCACGAGACGTTCGGTTGCCTGTTTCTCGATTCAAAAC ATCGTGTACTGGGTTTCGAGGCGTTGTTCCAGGGCACCATCGACGCCGCCATGGTTTATCCCCGGCAGGTGATCAAGCGCGCCCTGGCGTACAACGCGGC GGCGCTGATCCTGTGTCACAACCATCCTTCGGGGAATGTGGAGCCCAGCGCCGCTGATCGAAAATTGACCAAGGTGCTGCAAAAGGCCCTGGAAGTGGTG GATGTGCGAGTGCTGGATCACATCATCGTGGGGGATGGGGATCCGTTGTCGATGGCGGAATACGGATGGATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCCCGCCCACTGGGTGGGGGCTATTGGGTCAGGGCTTGACGCTGACTTTCGAGAAGTCCTGCCGCCCGAACGGGCTCACCTGGTAGCCCTCGACGGTTT TGCGCGCCAAGGCAAACGCCGTCGGGTGCGCCAGGGGCAACCACAAGGCCTGCTGCTGGATCTGCGCCTGGGCCTGTTGGTACAGCTTGCTGCGCACCCC TTGTTCGCTGGTGGTCTTGCCGGCGCTGATCAGCTTGTCCAGGGCAGGGTCGCAGTAGCGGGCGAAGTTGGTGCCGGATTTTACGGCGGCGCAGGAGAAC TGCGGGGTGAGGAAGTTATCCGGGTCGCCGTTGTCGCCGGCCCAGCCCATGAACAGCAGGTCGTGCTCACCGGCTTTGGCACGGCGAATCAGTTCGCCCC ATTCGATCACGCGGATTTCGGCCTGGATGCCAACCTTGGCCAGGTCCGCTTGCAGCAGTTGCGCACCGAGGTTCGGGTTCGGGTTAAGCAGGCTGCCGGT
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Amino Acid Sequence |
>hypothetical protein
MSIRDWPVAERPREKLLEWGAASLSDAELLAIFLRTGVSGRSAVDLARHLLVQFGGLRPLLEASQALFSQQLGLGPAKFAQLQAVLEMSRRHLAERLRSD SVLESPVAVRDYLKALLRHEPHETFGCLFLDSKHRVLGFEALFQGTIDAAMVYPRQVIKRALAYNAAALILCHNHPSGNVEPSAADRKLTKVLQKALEVV DVRVLDHIIVGDGDPLSMAEYGWM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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