Pseudomonas sp. TKP, U771_29435

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. TKP, complete genome. [Details]
DNA Sequence Upstream of Gene
CCGACGAGATGACCATCGTCCGTGAAGAAATCTTCGGCCCGGTGATGAGCATCCTCACTTACGAGACCGAAGCAGAAGTGATCCGCCGCGCCAACGACAC TGACTTCGGCCTGGCCGCCGGCCTGGTCACCAAGGACCTGAACCGCGCCCACCGCGTGATTCACCAGCTGGAAGCGGGTATCTGCTGGATCAACGCCTGG GGCGAGTCCGACGCGAAGATGCCGGTCGGTGGCTACAAGCAGTCGGGTGTGGGCCGTGAGAACGGGATCAGCTCGCTGAACAACTTCACTCGCATCAAAT CGGTACAGGTTGAGCTGGGCGACTACGCCTCGGTGTTCTAAGACCCGAGTTTTGTATTGCCTGTCAGGCCGCCATCGGGGGCAAGCCCCCTCCCACGTTT GACTGTGTTTACACATCTGAAACTGTGAACACAGTCAGTGTGGGAGGGGGCTCGCCCCCGATGAGGCCCGACCTGACCACACATCAAAGAGGGTGCATTT
DNA Sequence for Gene
>U771_29435
ATGTCCCAAGAATACGATTACATCATTGTGGGTGCCGGCTCCGCCGGTAACACCCTGGCGACCCGTCTGACCGAAGACGAAGGCGTCACCGTCCTGCTGC TGGAAGCCGGCGGTCCTGACTACCGTCTCGACTTCCGTACCCAGATGCCCGCCGCCCTGGCATTCCCGCTGCAAGGCCGCCGCTACAACTGGGCCTACGA AACCGATCCAGAGCCGCACATGAACGGCCGCCGTATGGAATGCGGGCGCGGCAAGGGCCTGGGTGGCTCTTCCTTGATCAACGGCATGTGCTACATCCGT GGCAACGCCCTGGACTACGACAACTGGTCGAAACTGCCCGGTCTGGAAGACTGGACCTACCTCGACTGCCTGCCGTATTTCCGTAAAGCCGAAACCCGTG ACATCGGCCCCAACGACTACCATGGCGGCGACGGCCCGGTCAGCGTGACGACGCCCAAAGCCGGCAACAACCCGCTGTTCCACGCCATGGTCGAAGCCGG CGTACAGGCCGGTTACCCGCGTACCGAAGACTTGAACGGCTACCAGCAGGAAGGCTTCGGCCCGATGGACCGTACCGTCACGCCAAACGGCCGACGCGCC AGCACCGCGCGCGGTTACCTGGACACGGCCAAAAAGCGTTCGACCCTGACCATCGTCACCCACGCCCTGACCGACAAAGTGTTGTTCGAAGGCAAGCGGG CCGTTGGCGTGCGTTACCTGATCGGTGCCGCCGAAGAGCGCGTCGAAGCCCGCGCCCGCAAGGAAGTACTGGTGTGCAGCGGCGCCATCGCCTCGCCGCA GCTGCTGCAACGCTCCGGTGTCGGCCCGGCCAAACTGCTGGAAAGCCTCGACATTCCGGTGGTCCATGACCTGCCCGGTGTCGGCGAAAACCTGCAAGAC CACCTTGAGCTGTACCTGCAATACGCCTGCACCCAACCGGTGTCGCTGTACCCATCGCTGCTCTGGTACAACCAGCCGGCCATCGGTGCCGAGTGGCTGT TCAACGGCACCGGCATCGGCGCCAGCAACCAGTTCGAGGCCGGCGGTTTTATCCGTACCCGTGAAGAATTCGATTGGCCGAACATCCAGTACCACTTCCT GCCGGTAGCGATTAACTACAACGGCAGCAACGGCGTGAAAGAGCACGGTTTCCAGGCGCACATGGGGTCCATGCGCTCGCCAAGCCGTGGCCGCGTGCAA CTGAAGTCGAAGAACCCACGGGACTACCCGAGCATCCTCTTCAACTACATGGCCACCGAGCAGGATTGGCAGGAGTTTCGCGACGGCATCCGCCTGACCC GCGAAATCATGCAACAGCCGGCGCTGGACCCGTACCGCGGCCGCGAAATCAGCCCGGGCATCGAGGTGCAAACCGATGAGCAACTCGACAAGTTCATCCG CGAACACGCCGAAACCGCGTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGATGAGATGGCCGTGGTCGATGGCGAAGGCCGCGTGCATGGCATGCAA GGCCTGCGTGTGGTCGATGCGTCGATCATGCCGATCATCACCACCGGCAACCTGAACGCGCCGACGATCATGATCGCCGAGAAAATCGCCGACAAGATCC GTGGTCGCAAGCCGCTGCCGCGCAGCACCGCCGACTACTACGTGGCAGGCACCGCGCCGGTGCGTGGCAAGCCGCTGCGGGAAGTGGGGCCGACTGCGCA GTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGATACACCGAGGCGCCTGCATCGGGGGCAAGCCCCCTCCCACATTTGAATGTATTCACAAATCAAGTGTGGGAGGGGGCTTGCCCCCGATAGGGCCCG ATCAGGCACTGCAAACCTTGCCTCTACACTTTCCTTGATCAGCCCCCAGCCCAGGCCTACTCTGTTTGCCTGCCCGCGCTGAGCCGCCCACAAGGAAGGC CCCATGTTCGAACACCACGCCACACTCAAAAAACATTTCAGTGCCCTGCGCACCACCGCCGACTTCTTCTCCCTGCGCTACGTACGTGAGTCCGGCCACT ACCTGTCGGTGCGCAAGAACGTCGCCGAACCGCCACACCTGAACCACGACGCAGGCGCCATGCTCACCGTGCGTGTCAACGGCGTCGAAGCCTATGCCGC GACCCACGATATTTCCCTGGCCGGCCTGCAAGCGGCCCTTGAACGTGCCGAACAGCAAGCGCGCCTGATCAAGCCTCACGCCCTGCTCGACCTGCGCGAT
Amino Acid Sequence
>choline dehydrogenase
MSQEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNWAYETDPEPHMNGRRMECGRGKGLGGSSLINGMCYIR GNALDYDNWSKLPGLEDWTYLDCLPYFRKAETRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQQEGFGPMDRTVTPNGRRA STARGYLDTAKKRSTLTIVTHALTDKVLFEGKRAVGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLPGVGENLQD HLELYLQYACTQPVSLYPSLLWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRTREEFDWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRVQ LKSKNPRDYPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIEVQTDEQLDKFIREHAETAFHPSCSCKMGTDEMAVVDGEGRVHGMQ GLRVVDASIMPIITTGNLNAPTIMIAEKIADKIRGRKPLPRSTADYYVAGTAPVRGKPLREVGPTAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site