Pseudomonas sp. TKP, U771_28330

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. TKP, complete genome. [Details]
DNA Sequence Upstream of Gene
CCCCAACATGAAACCGCTGCACGACCTGTCGAACATGGCCGACGCCTTGTCCGTCGAAGCGGCGCCTGCGGCCAAGCAGGACTTGCCCAATGCGCCGGTG GTGCAAAGCCTCGACGGCCAGCATATTCGCCTGCCGGGTTACATCGTGCCGTTGGAAGTCAGCGAGGAAGGCCGTACCACCGAGTTCTTGCTGGTGCCGT ATTTCGGCGCGTGCATCCACGTGCCGCCGCCGCCGTCGAACCAGATCGTGCACGTGAAAAGTGAGGTTGGGGTGAAGCTCGATGAGCTGTACCAGCCGTA CTGGATCGAAGGGGCGATGCAGGTCAAGCCGTCGTCCAGTGAGCTGGCGGACGCCGGCTACCAGATGGATGCCGAGAAGATTTACCTCTACGAACTGCCG GAATAACGCTTATCACCCTTTCATTGAGCTGAGTCAAAAGTCCGAACGGAACGATCTTTACCATTGGACGTACAACTTTTAAACGTCCCTTGGAGCTCCC
DNA Sequence for Gene
>U771_28330
ATGAACAACAAGTCTCTGCTCGGCGCGTCCCTCTTCGCGCTCGCCCTCGCGGCCCCCGTAGCCCACGCTCACGAAGCGGGCGACATTCTGGTTCGCGCTG GTGCAATTACCGTGAACCCGAAGGCCGACAGCGGCAGTGTCAAGGTAGACCAGGGCCCGCTGGCTGGTACCAACCTGGGCGGCAAGGCGACCATGGACAG CGACACGCAACTGGGTCTGAACTTCGCCTATATGTTCACCAGCCACTGGGGTATCGAACTGCTGGCGGCTACCCCGTTCGAGCATGATGTGAAGCTCAAG AACACGGCTCTCAGCGCCGCCAACGGCAAACTCGGCACCCTGAAACACCTGCCGCCAACCCTGAGCGTTGTGTACTACCCGCTGGACAGCAAGTCGGCGT TCCAACCGTATGTGGGTGCCGGTATCAACTACACCTGGATCTATGACGAACACGTCAGCAGCGGCGCCCAACAAGCTGGCTTCAGCAACTTCAAGGCCGA TAACTCCTGGGGCTGGGCCGCGCAAATTGGTGCCGACTACATGATCAACGATAAATGGATGATCAACGGCCAGGTGCGCTACATCGACATCAGCACCACC GCCACCGTTGAAAACAACGGAGTGGCCCCAGGCACTCGCGCCAAGGTTGATGTCGATGTCGACCCATTGGTCTACATGGTCGGTATCGGCTACAAGTTCT AA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGAAATCGAACAAACGCCACACAACCAATGTGGAAGGGGGCTTGCTCCCGATAGCGGTGGATCAGTCAATGAATCGGTTGGCTGACACCGTGTTATCGG GGGCAAGCCCCCTCCCACATTTTTGCTTTGTGTGGTGTCAGCCGCGGCGGTAGAACCGGTCCAGCAACGCCGGCAACCCGGCCCGCCACGCCCGTGGCTT GATGCCAAAGGTATGCAGGATTTTCTTGCAGGCCAGCACCGCATGTTGCGGTTCGTCGCCCGCATCCGGCCTTGCCGCATGAGCCTGGGCGGTGGGCGAT TCGATCGCCAGCGGATGAAAGTGACGCGCTTCGGTAAGAATCGCCTGGCCCAGCGCCAACGGGGTCGTCGCCTCGTGGCCGGCATAGTGATAGGTGCCCC ATAGCGGCGCCGCGCAATCGAGTTGCTTGAGCACCGAAAGGATCACCCGCGCGGCATCGTCCACCGGGGTCGGATTGCCGCGCCGGTCATCCGCCATCAG
Amino Acid Sequence
>outer membrane protein W
MNNKSLLGASLFALALAAPVAHAHEAGDILVRAGAITVNPKADSGSVKVDQGPLAGTNLGGKATMDSDTQLGLNFAYMFTSHWGIELLAATPFEHDVKLK NTALSAANGKLGTLKHLPPTLSVVYYPLDSKSAFQPYVGAGINYTWIYDEHVSSGAQQAGFSNFKADNSWGWAAQIGADYMINDKWMINGQVRYIDISTT ATVENNGVAPGTRAKVDVDVDPLVYMVGIGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site