Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCAGTGGACGCCACCACCGGCACAGCACGCCCCAGATACTGTCGTCGTGCCGCATGCCGCGCCGGGGGCTTCTACCGCCGGCGGCCAATACCTGCAAGT GGGCGCTTTCGCCAACCCGGACGCGGCAGAACTGTTAAGGTCCAAGTTGAGCAGCATGGTCAACGCGCCGGTGTTCATCAGCTCCATCGTGCGTAACCAG CAAACGCTGCACCGCGTGCGCATGGGCCCGATCGGCTCGCCGAGCGAGGTTGCGCAAGTGCAGAACAGCGTGCGCCTGGCCAACCTGGGGCAACCCAGTG TGGTCACCGCCGAATAAGTACCAAAAGATAGATGGTTCGGGCCCGTGCGCGGGGCCGAACCCTGGTTGTTGGCTCGTTGAACAATAAAACCCAGGGGCAA GGGGTGAGCGGGCAACCGAACACGTGACAGTCTGGCAACGGGCTGTCTGAATGAGTTTTGCCCGCGAGGGCAAGTTTCCATAAGTAATTTCGAGAGACGG
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DNA Sequence for Gene |
>U771_27880
ATGAACATCACCACCTTAGCCAAACGCACGTGCCTGCTTATCTCGCTGATCATCACCCCGGCCGCCTGGGCGGTTGAAATGGTGCCGGCTTCACCGCAAC TGGCCGCCAAGGCCTGGGTCCTCATGGATGCCGCCAGCGGCAACGTGCTGGTCGAGAACAACGGTGACCAGCGCCTGCCGCCGGCCAGCCTGACCAAACT GATGACTGCCTACATCGCGACCCTGGAAATCCGTCGCGGCCAGATCGGCGAGAACGACCCGGTGACCGTCAGCGAAAACGCCTGGCGTACCGGCGGTTCG CGCATGTTCATCAAGGTTGGCTCCCAAGTAACGGTGAGCGACCTGCTGCACGGCATCATCATCCAGTCCGGTAACGACGCCAGCGTCGCCCTGGCCGAGC ACATCGCCGGCAGCGAAGACGCGTTCGCCGACATGATGAACAAAACCGTGGCCGACCTGGGCATGACCAATAGCCACTTCATGAACCCGACCGGTCTGCC GAACCCTGAGCACTACTCGTCGGCACATGACATGGCGATCCTGGCGCGCGCGATCATTCGTGTCGACCCGGTGCACTACGCGATCTACTCCCAGAAGGAA TTCTTCTGGAACAACATCAAGCAGCCTAACCGCAACCTGCTGCTGTGGCGCGACAAGACTGTCGACGGTCTGAAGACCGGCCACACTGAAGAAGCCGGCT ACTGCATGGTGTCGTCCGCCGTGCGTGACGGCCAGCGCCTGATCGCCGTGGTCTTCGGCACCAACAGCGAGCAGGCGCGTGCCGCCGAGACGCAAAAACT GCTGACCTACGGCTTCCGCTTCTTCGAAACCCAGACCTTCTACCAGAAGGGTGCTGAACTGGCGACCGCGCCGGTTTGGAAAGGCGCGACCTCGCAAGTC AAGGCTGGCCTGGCTGAAGACCTGACCCTGACCATGCCTAAAGGCCAGCTGAAAAAGCTCGCTGCCAGCATGACCATGAACCCGCATCTGGTTGCACCAA TCGCCAAGGGTGATGTGATCGGTAAAGTCGAAGTGAAGCTGGACGACAAGGTGGTGCACAGCGCCGACCTGATCGCCCTGGACGCCGTCGACGAAGGTGG TATCTTCCGCCGCGTGTGGGATAGCATCCGTCTATTCTTCTACAGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAAGTGTGCACCTGCAAAGCCCCGTGTTGATCCGACACGGGGCTTTGCCCGTCGCCACGGCTTACGCTTACGAGGCCGTTACGCCATGACCGATAAAGAA GTAAAGGCGCCAAAGATCGAATTCCCAAACGTGGATTATCCCGTCAAGGTGATCAGCGATACCGGTGTAGGCAACAAAGACACGATTCTTCAGATCGTGC GTAAACACGCGACGATCAATGACAACCGGGTGGACGAGCGTTTGAGCTCCAACGGTAAATACACCACGATCCAGTTGCACATCGTTGCGACCGGTCAAGA CCAGCTCTACGACATCAACAGCGAACTGCGGGCCACCGGCTTCGTGCACATGGTGCTGTGATGCCACAGGTCCTGGGCTTTCGCGAGCTCGGCCGGATGG ACTACGAGCCCGTCTGGCACGCCATGCAGCGGTTCACGAATGAGCGCGGCACTTCGGCGCCCGATGAAATCTGGCTGGTGGAGCACCCGCCGGTGTTCAC
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Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITTLAKRTCLLISLIITPAAWAVEMVPASPQLAAKAWVLMDAASGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIRVDPVHYAIYSQKE FFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCMVSSAVRDGQRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGAELATAPVWKGATSQV KAGLAEDLTLTMPKGQLKKLAASMTMNPHLVAPIAKGDVIGKVEVKLDDKVVHSADLIALDAVDEGGIFRRVWDSIRLFFYSLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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