Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCTCTAATGAGCGATCAGCAATATTGGTTTTTCTTATACAACTCGCCCCATGAGAATAGCCAGCATTGCTTCTCTCTTTAAAAGGAACCTCACATGGCTG GCGAAACCGCCCTGGCGACCCTGCTGCGCAGCATGAGCCCGCAGTTGAACACGGGTGAGTATGTGTTCTGCACCCTGCCCGACCACCGTATCCCTGCGGG TTGCGAGGTCATCGGCAGCTTTCGCGAACCGCAAGGCCTGACGTTGATCCTGGAACGCCAGCAAGCCGAACTGGCCGGGCTGCCCTTCGACTATGTGGCG GCCTGGATCACCTTGAATGTGCATTCGGCCCTGGAGGCGGTGGGCCTGACCGCCGCCTTCGCCGGCGCGTTGGGCAAGGCCGGCATCAGTTGCAACGTGA TTGCCGGGTATTACCACGATCACCTGTTTGTCGGCCATGCGGATGCCGAACGCGCCATGGACGTACTACGGCATTTGGCGGCGAACGCGGAGTAAACCCT
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DNA Sequence for Gene |
>U771_25210
ATGTGGCAAAGCTATCTGAATGGCCTGTTGGTGGCCCTGGGCCTGATCATGGCGATCGGCACGCAAAACGCATTTGTATTGGCGCAGAGCCTGCGCCGTG AACATCACCTGCCAGTGGCGGCATTGTGTGTGGTGTGCGACGCGATTCTGGTCGCCGCCGGGGTTTTCGGCCTGGCGACGGTGTTGGCGCAGAACCCGCT GTTGCTGGCAATTGCCCGCTGGGGTGGGGCGGCGTTCCTGCTGTGGTACGGCACCCTGGCGTTGCGCCGGGCGTTTTCCAGACAAAGCCTGGAGCAAGGC GGCAACCTCAAGGTGCGTTCATTACGCGCGGTCATGCTCAGTGCCCTGGCGGTGACGCTGCTCAATCCCCATGTATACCTGGACACGGTGTTGCTGATTG GCTCGCTCGGCGCGCAGCAGACCGAACCCGGCGCCTACGTCGCCGGCGCAGCCAGCGCTTCGTTCCTGTGGTTCGCCACGCTGGCGCTCGGCGCGGCCTG GTTGGCACCCTGGCTGGCACGCCCGGCAACATGGCGCCTGCTGGACATGCTGGTGGCCGCGATGATGTTCAGCGTCGCTTATCAATTGATTGCTGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGAATATTCCAAAACGCTCTGGAACCTCTATCCCACACAGTTGTTGCGTGGTTTTGCCGTACCCCCGGTGCTATGATCCGGACCCTGCGCCGCAAAGAGT ACAAACTCCCCGGCGCTTGTTTGGCCGCCCGTGATCGGCCTTGCGCTCACCGCAACTGACCTGATTAGGAGAATCATCATGGCTTTCGAATTGCCGCCGC TGCCCTACGCACACGATGCCCTGCAGCCGCACATCTCCAAGGAAACCTTGGAATATCACCACGACAAGCACCACAACACCTATGTCGTGAACCTGAACAA CCTGGTGCCTGGCACCGAGTTCGAAGGCAAGACCCTGGAAGAGATCGTCAAATCCTCTTCGGGCGGTATCTTCAACAACGCCGCTCAGGTCTGGAACCAC ACCTTTTACTGGAACTGCCTGGCGCCAAACGCCGGTGGCCAACCGACCGGCGCACTGGCTGAAGCGATCAACGCTTCGTTCGGTTCGTTCGACAAGTTCA
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Amino Acid Sequence |
>amino acid transporter LysE
MWQSYLNGLLVALGLIMAIGTQNAFVLAQSLRREHHLPVAALCVVCDAILVAAGVFGLATVLAQNPLLLAIARWGGAAFLLWYGTLALRRAFSRQSLEQG GNLKVRSLRAVMLSALAVTLLNPHVYLDTVLLIGSLGAQQTEPGAYVAGAASASFLWFATLALGAAWLAPWLARPATWRLLDMLVAAMMFSVAYQLIAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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