Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCTTCGAAGAACTCTTCCGGTAAATCCAGATGCGCCTGCATCCAGCGCTCGCACGCGGCGTGGGCCAGGTTCAGGTGCAGCCAGAGGAATTCTTCCGGG TCGCCCGGTTGCTGTAATGCTTGCAAGGCCGTGGCTGAATCAATCTGCTCACCCTTTTCACCGGGGCGAAAACGAAAACCGTAAAGCAAGCCAAACAGAT CAGGATCCTGGTGGCTGTGGTCGATGCTGTGGTTCATGGCGGCTCGCAAAGAAAGCGCCTGTAGGACGTTTCACAGGTTCGCGTGGGCGAATCATTGCAA GGATATTTGACAGTTTTGTGACCGTTTGAAGGGGGCGAGCATAATTAAGACACTTTTTTGACCATCGGTCCGATAGGCTCAAGAAGCGTCTAGGACAGCC GATCCAGCACATAAGCACCCTACGTCCAGGCGTGCCTTTTATGACAGGGAAGTTGAGGCGTGCATGCACCCTATTTTCTTTGTATCGAGAATTCCCCCCA
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DNA Sequence for Gene |
>U771_24915
ATGAATCTTTTGCGAACTTCTTTGAGAGCACAAATCCTGTCGTTGCTCGGTGGCAGCCTGTTGGCGATGCTTTTGATTGCCCTGGCCTGTTTCAACTTCC TCTCCAGCGGGGTACAGAGCTATCGCAGTTTGCTTGAAGGGCCGTTGCTGACCTCACAGTTGATCGATGAAGCCAACCTGCAATTCAAGGTGCAGGTGCA GGAATGGAAAAACGTGCTGTTGCGCGGCAAGCAGCCTCAGGAGTTGGAGAAGTACTGGAGCCAATTCCAGGACCGGCAGCGCGATGTCCAAGGCATTCTG ACGCGGCTGGTGACCCAGACCAACAGCGACCCGGCCCTTAGCCGGCGTATTGAAACCCTGCGTCAGGAACACCAGCAACTCGGCGTCGCCTATCAGAAGG GCCGTGATGCCTATGTGGCCGCGGGTGCCGACCCGGTCGCCGGTGATACGGCGGTCAAGGGCGTGGACCGCTCCGCCAGTGAGCAGATGAGCGCCCTGGT CAGCGACCTGCGGGCCCAAGGCACCCAGCAATCCCAGGCCATCAGCGCCTATGCCGAACGCACGGTACTGGTGGGCCTGGCGATCATGCTGCTGTCCGGT GTACTGATTGGTTTGTTCAGCCTGTGGTTGATCAACCGCAACCTGATCCTGCCGATCCGTGGCCTGATCGACTACGTGACCCAACTGAGCCATGGTCGAT TTGCCGAGCGCGTCGCCAGCCGCCGTCAAGACGAACTGGGGCACCTGGCCGCTGCTGCGAATACCTTGCGCGACTTTTTGGCCGAAACCTTCAGCCGCCT GCAACGCAGTGCCACCGATCTGGTCAACGCCAGCGGCGAGTTGAACTCGATCGCCGGGCAGATGGCGACCGGCACCCATGAACAATTCAATCGCACCGAC CAGGTGGCCACGGCCATGACCGAAATGTCGGCCACCGCGCAGGAAGTGGCGCGCCACGCCGCCAGTGCTTCGCGCGCGGCCGATGAGGCCGACCATTCAG CCCGCGAGGGCGGCGAAGTGATGAAAGTCACCATCGCCACCATCGGCCAGATGCGCGATGAAATCCTCAACACCGGTACGATCATTCGCCGCCTGGAAAC CGACAGTGTGCGCATCGGCAAAGTGCTGGAAGTGATTCGCGGGATCGCTGAGCAGACCAACCTGCTGGCGCTTAACGCGGCGATTGAAGCGGCACGGGCG GGCGAGGCGGGGCGTGGGTTTGCGGTGGTGGCTGATGAAGTGCGCAGCCTGGCGCAACGCACGGCGGCGTCGATCATCGAGATCAACCAGATTATCCAGG CCGTGCAAACCGGTGCGGTGGATGCGGCCGAGGCGATTGTCACGGGCCAGTCGTGCAGTGATGACAGCGTGGAAAAAGTCACCCAGGCCGGCGCGATGCT CGCTCACATCACCCAGGCGGTGGAAGCGATTCGCGACATGAACCGTCAGATTGCCACGGCGGCCGAGGAACAGACGTCGGTGGCCGAAGACATTTCGCGC AATATCACCCAGATCACCACCGTGGCCACGACCAACCTCGACAACGTGAAGCGCACCGAAGCGGCGAGCCACAACTTGCGCGGCTTGTCCGGCGAGTTGA ACGAGGTGACGGCGCGCCTGAGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGGCTGAAACGGCCTTGCGCCCTCTGCGCGCTGAGCGGCTCCGGGCCGTCATGGTTGCGGCGATGAAGGGCAGTGACCAGCAGGTAGATGGATGAACG CCCATAAAAAAACCGCGCCACCTAAAGGTGGCGCGGTTTTTTCAAGGGTTGACTCAAGTGTCGAGTTTGTCTTCCAACACGGCGCCGGTCTTGGCGTCGA GTTTCACTTCGAACTTCTTGCCGGCGGTGTCGGTCAGGTCGACTTCGTAGACCAGTACACCGCTTTTGTTGTGGTCCAGCTCGGTGTCGGTGATGCTGGC ACCTGCGTGCTTGGCCAGCGCGGCGGCATTGAGTTGCTCGAAAGGCTTCACGGCACCGGACTTGAGCAGGCCTTCAATGTGATCCGGGCGAACATCCGCC TGGGCCAGGCCGGCGGTCAGGGTCAGGGCAGTGGCGGCGAACAGGGCAGTCAGGGTTTTCATCGTGTGTGTCCTTCTTTGTTGAGCTGTTTAAGTGGCGC
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Amino Acid Sequence |
>methyl-accepting chemotaxis protein
MNLLRTSLRAQILSLLGGSLLAMLLIALACFNFLSSGVQSYRSLLEGPLLTSQLIDEANLQFKVQVQEWKNVLLRGKQPQELEKYWSQFQDRQRDVQGIL TRLVTQTNSDPALSRRIETLRQEHQQLGVAYQKGRDAYVAAGADPVAGDTAVKGVDRSASEQMSALVSDLRAQGTQQSQAISAYAERTVLVGLAIMLLSG VLIGLFSLWLINRNLILPIRGLIDYVTQLSHGRFAERVASRRQDELGHLAAAANTLRDFLAETFSRLQRSATDLVNASGELNSIAGQMATGTHEQFNRTD QVATAMTEMSATAQEVARHAASASRAADEADHSAREGGEVMKVTIATIGQMRDEILNTGTIIRRLETDSVRIGKVLEVIRGIAEQTNLLALNAAIEAARA GEAGRGFAVVADEVRSLAQRTAASIIEINQIIQAVQTGAVDAAEAIVTGQSCSDDSVEKVTQAGAMLAHITQAVEAIRDMNRQIATAAEEQTSVAEDISR NITQITTVATTNLDNVKRTEAASHNLRGLSGELNEVTARLSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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