Pseudomonas sp. TKP, U771_23645

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. TKP, complete genome. [Details]
DNA Sequence Upstream of Gene
GGGCATCGGAGCGCCCGACAAGCTGTTCGTGCAGGAAGGCCGCAAAGTCTTCCGCGATGTCTGCCCGATGGTCGCCGAGCTGATCGGTGTGCACCTGGAA GAGAACCAGCTGAATGTGGCCGATGTGAAGCGCTTCTGGCTGCACCAGGCCAACCTGAGCATGAACCACCTGATCGTGAAGAAACTGCTGGGCCGCGAAG CCACGGTGGAAGAAGCACCGGTGATCCTCGACACTTACGCCAATACCAGTTCGGCAGGTTCGGTGATTGCGTTCCACACCTACCAGGACGACTTGCCCAA GGGCGCCGTGGCGGTGCTCAGCTCGTTCGGCGCCGGGTACTCCATTGGTAGCGTGATCCTGCGCAAACGCTGATCTACCGGTCGGTCACGATCCAATGTG GGAGCTGGCTTGCCTGCGATTGCATCACTGCGGTGCCAGCATCGCAGGCAAGCCAGCTCACACGGGAATCGGGTTTTCCACGGTGGAATCGAGGTAGACG
DNA Sequence for Gene
>U771_23645
ATGGCGGCAGCGGACGACGCGCACCTGCTTGAACGCTTGCTCAAGGGCGAGCAGCGGGCCTACAAGGAATTGGTCACCCAATACCAGAGCGCCATGCGCG CGGTGGCCTATGCCATCGTCGGTCAGCGCCATGCCGATGAAATCGTGCAGGACGCCTGGCTGGCGGTCGTGCGCAACCTGCCCAAGTTCGAAGGACGCTC CAGTCTCAAGACCTGGCTGCTGACCATCACTGCCAACGCCGCCAAGAGCCGTTACAAACAGAATCGCCGGGAAGTATTGCTCGACGATTTGCCCTCGCCC CATGGCACGATCGGTGATGAGCGTTTCTCGCCCGACGATGGCCACTGGGCCGTCGCCCCCTATGCCTGGCACCAGGACACGCCGGAAGCCCTGCTGACCG AGGAAGAGCTGCGCAAGTGCCTGGAGCATACGTTGCTGAGTTTGTCTGAGTTGCAAGGCAGCGTGTTGGTGTTGCGCGAACGCCAGGGCCTGGAACTGGA AGAGATCTGTAATCTTCTAACGCTGTCGCTCTCCAACGTTCGTGTGCTGCTGCATCGAGCGCGGCTTAAAGTCTTCGCCACGGTGGAGCATTTTGAGGAA ACGGGCGAATGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGTAAAGAGCAAGTGGCACGTTCCAGTGACTATCTCGATGGGCAATTGACCTTTCGCGAGCGCCTGTTGGTGCGTCATCACTTGATGTTTTGCCCGAA CTGTCGGCGGTTTATCCGCCAGATGCGCCTGATGCAGGCGACGTTGCGGATCTTGCCGCAGCCGCCGGTCGACGATGCGGATGCCTTGGCACAGCGGCTG GCTGCCGAGCGGCTCAAGGATCAGGAGTAGCGGGGAAGCAAAAGCAGGCTCGCGTGGGTGAGTCGAACGGATGATGGGGACCGATTCACCCACGCAAGGC TGTTACAGCCACCTCGGGCCGTCCTGGCCCAAGGCTTGTCACACGGGTATTCAGAACTTGGCTTCAGCATCCAACTGCAGGGTGTTGGTGTTGGCATCGC GCTGAGTGCGGCTGGCGTAGTCAGCCTTGGTCAGGAAGTACGTGGCGCCGACGGCGAAGTTTTTGTCGATGTCGTAGCTGACCTTCATCTTGTGGCCGCG
Amino Acid Sequence
>RNA polymerase subunit sigma-24
MAAADDAHLLERLLKGEQRAYKELVTQYQSAMRAVAYAIVGQRHADEIVQDAWLAVVRNLPKFEGRSSLKTWLLTITANAAKSRYKQNRREVLLDDLPSP HGTIGDERFSPDDGHWAVAPYAWHQDTPEALLTEEELRKCLEHTLLSLSELQGSVLVLRERQGLELEEICNLLTLSLSNVRVLLHRARLKVFATVEHFEE TGEC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site