Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCTCGCTCACGGTGTCTCGGCTGCCGCGCTGTTTATCCTCAGTGGCCAGCTGTACGAGCGCCTGCATACCCGTGACATGCGTGAGATGGGTGGCGTGTGG TCGCGCATTGCCTACCTGCCGGCGATCAGCCTGTTCTTCGCCGCCGCGTCCCTGGGCTTGCCGGGTACCGGCAACTTCATCGGCGAGTTCCTGATCCTGA TGGGTTCGTTCGTACACACGCCATGGATCAGCGCCATCGCCACCTCCGGCCTGGTGTTCGGTTCGGTCTACTCGCTGATCATGATCCACCGCGCGTACTT CGGTCCGGCCAAGTCCGACACCGTGCTGCACGGGATGGATGCTCGCGAACTGATCATGGTGCTCGGTCTTGCGGTCTTGCTGATCTACATCGGCGTTTAC CCGCAACCGTTCCTGGACACTTCTGCCGCAACGATGCATGGCGTGCAGCAGTGGTTCGGCACCGCCTTCTCTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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DNA Sequence for Gene |
>U771_20185
ATGGAATTCACGATCCAACACTTTATCGCGCTTGCGCCGCTGCTGATCACCAGCCTCACCATCGTGGTGGTGATGCTGGCGATCGCCTGGCGCCGCAATC ACTCGCAAACGTTCCTGCTGTCCTGCGCGGGCTTGAACCTGGCCCTGCTGTCGATTATCCCGGCACTCAAGGTCGCACCACTGGCGGTCACCCCGCTGAT GATGATCGATGACTTCGCGTTGCTGTATATCGCGCTGATCCTCGTGGCGACCCTGGCCTGCGTCACCCTCGCCCACGCCTACCTCGGCGAAGGCGGCACG GGCTACCCGGGCAACCGCGAAGAGCTGTACCTGCTGATCCTGCTGGCTGCGGCCGGCGGCATCGTGCTGGTCAGCGCGCAGCACCTGGCCGGCTTGTTCA TCGGCCTGGAACTGCTGTCGATCCCGACCTACGGCCTGGTGGCCTACGCCTTCTTCAACAAGCGCTCCCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCCGCCGGTTCCGCGTTCCTGTTGTTCGGCATGGCCCTGCTCTACGCCGAAGCCGGCAGCCTGAGCTTCACCGGTATCGGTCACGCCCTGGCCGCCACC AACAGCCCCGCGCCGATTGCCCAACTGGGCCTGGCGATGATGCTGATCGGCCTGGCGTTCAAGCTGTCGCTGGTGCCGTTCCACTTGTGGACCCCGGACG TGTACGAAGGCGCCCCGGCGCCGGTCGCCGCGTTCCTGGCCACCGCGTCGAAGGTTGCCGTGTTTGCGGTGATGGTGCGTCTGTTCCAGATCTCTCCTGC CGCCAACACCGGCGTGCTGAGCAACGTGCTGACCGTGATCGCCATTGCGTCGATCCTGTTCGGTAACCTGCTGGCACTGACCCAGAACAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCCCACTTCGGCTACCTGCTGATCGCCCTGGTGGCGAGCAAAGGCCTGGCCGTGGAAGCGATCGGCGTGTACCTGGTCA CCTACGTGATCACCAGCCTCGGCGCGTTCGGCGTGATCACCCTGATGTCCTCGCCTTACAAAGGCCGTGACGCCGACGCCCTGTACGAATACCGCGGCCT GTTCTGGCGCCGTCCGTACCTGACCGCCGTGCTGACCGTGATGATGCTCTCCCTGGCCGGTATCCCGCTGACCGCGGGCTTCATCGGCAAGTTCTACATC GTCGCTACCGGTGTCGAAGCCCACGAGTGGTGGTTGGTTGCATCCCTGGTGCTGGGCAGTGCCATCGGCGTGTTCTACTACCTGCGCGTGATGGTCACCC TGTACCTGATCGAGCCAAACCTGCGCCGTGTTGACGCCGAGCTGCACTGGGAACAGAAAGCCGGTGGCGTGATGCTGCTGGCCATCGCCCTGCTCGCCTT CTTCCTGGGCGTGTACCCACAACCGTTGCTCACCCTGGTGCAGCACGCGGTGCTGGGCGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTGCCTAGCGGGATGTCAGTAAACAGAAACGGCGCCTTCGGGCGCCGTTTTGCATGCTGGGGAAAATTGTTCCAGGCTTCGTTCAAACAATCAGTTCCTG AGCGGTCATCATCAGCTCAGTGCCGACCCGATTTTTTAACGTCTCGATGAAGCGGGTAATTTTCGCATCGATGAACTGCCGTGATGTGTAGACGGCGTAA ACATTGCGCTCGTAGGTGTGATACTCAGGCAGAACACGCACGAGCCTGCCTGAACGCAGGTCCTCGATAGCTGAAAAGCCGGCCAGCAAACCTATGCCTG CGCCCTCTCGAATGGCGGACGCCATTGCGTCCATATCATTGACGCTGAAACTCGGGCCCTGGGGGGCGAACGTGGCATCCCCGGCCTTGCTCTTCAATTG CCACTCATCCCGCACATAATCGACGGTGCCCAACAGCAAGCACTGGTGATCATCGAGATCTTCCGGCGTCACAGGGGCTGGGTGTCGTTCCAGATAGGCT
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Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MEFTIQHFIALAPLLITSLTIVVVMLAIAWRRNHSQTFLLSCAGLNLALLSIIPALKVAPLAVTPLMMIDDFALLYIALILVATLACVTLAHAYLGEGGT GYPGNREELYLLILLAAAGGIVLVSAQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGSLSFTGIGHALAAT NSPAPIAQLGLAMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPAANTGVLSNVLTVIAIASILFGNLLALTQNNLKR LLGYSSIAHFGYLLIALVASKGLAVEAIGVYLVTYVITSLGAFGVITLMSSPYKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI VATGVEAHEWWLVASLVLGSAIGVFYYLRVMVTLYLIEPNLRRVDAELHWEQKAGGVMLLAIALLAFFLGVYPQPLLTLVQHAVLGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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