Pseudomonas sp. TKP, U771_19280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCCAGTGCGAAGTGGTGGGGGAGACTGGCATCGCCAAGCTGCCGGAACCGTCCCAGGTGCAATTGCGCAGTGGCGCCAAACTGTCCAATGCGATTCTGAT GGATTGGAAAGACCGGTTTATCGGCGCTTATGACGTGGAATTGCAGGCCTTCATTGATAGCGTGCTGGCGGGGCACGTCGGCGGGCCGTCGGCGTGGGAT GGCTTTGCGGCTGCGGTGGCGGCGGATGCGTGTATCGAAGCGCAGGGCAGTGGGCAGATCGTCAAGGTCAGCCTGCCGGATCGCCCACGCTTCTACGGCT AACACTCGGTCAATGTGGGAGGTGTAGGAGCGAGTTTGCTCGCGAAGAACGTCAACGATAACGCGTGTTTCCTGAATGAACGCGGCGCCTGTGAGTTTTT CGCGAGCAAGCTCGCTCCTACAAAAAAGCCTTAATGACTGGCATTAGGGCAAGCCCCTCCCACCGTTGATTGGGTTTCCAATTCAACTCAGGAGTTGATC
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| DNA Sequence for Gene |
>U771_19280
ATGCGAATCGGACTAGTCGGCTACGGCCACGGCGGACGCTTCTTTCATGCGCCGCTGATTGCAACGCTGCCAGGCGCCGCGTTTGTCGGCGTGGTGACGC GTTCACCCGAGCGCCGCCAGCAATTGAGCACTGATCTTCCAGGGGTCAAGGCCTTTGACAGCATCGGCCAGATCGTCGAAGCCGGTGTCGACGCCCTGGT GATTTCCACCACCCTCAAGGGCCGTCCGGCCCTGGTGCTGGAGGCCATCGAGCATGGCGTGGCGGTGGTCAGCGACAAGCCCTTCGCCGCCAACGCCGAG CAGGCCCAGGCGCTGATCACCGCCGCCGAACGCCAGGGCGTGTTACTCAGCGTCTACCAGAACCGGCGCTGGGACTCGGACTACCTGACCCTGCGCAAAC TGATCGACGCCGGTGCGCTGGGTACCATCACCCGCTTCGAGTCCCGTGTGGAGCGCTACAGCCCGCAAGCGGTGGGCAATGCTAGCGGTGGCGGCTGGTT GCGCGACCTGGGTAGCCACCTGGTGGACCAGGCACTGCAACTGTTCGGCCCGGTGGATCGGGTATTCGCACAGTTGCAGTTCACCCCGCAACATCCCACC CTCGACCATGGCTTCTTCGTTGCCCTGACCCACGCCAACGGGGTGATTTCCCACTTATGGGGCAGCGCCCTGCAAAATAGCCAGGCGCCGCGCTTTCGCG TCAGTGGCACCTTGGGTTGCTACACCGTCGATGGTTTGGATGGCCAGGAAGAGGCGCTGATGGCCGGTAAGTCGCCGAAAACCGAAGGCGAGCACTGGGG CGCTGAGGAGCATCGACGCTGGGGGTGGTTCGAACAGGGGCCGGAGCGCGAGCGGGTACCGTCGGAGAAGGGCTGCTGGACCCAGTTCTATCGGCAGTTG CAAGCCGCCGTGCAAGGCCGGGGACCGCTGCCGGTGGACGCCTATGACGCACTGGAAACCACCCGGCTACTGGATGCCGCACGCCTCAGTGCCGAGCGCC AGCAGGTGGTTTCAACAAAAATGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATTCTAAAACAGGTTGATATGGAAATTATTTTCTAATAAAGTCTTTTCCAGGTTGCAGAAAGTACGTTCGGACTCGATTCGGGCGACTCAACAAAAACA AGATCAAAAACAACCAGGTACCGTCAGATGAAAATCTTCAGCGCTGTACTGCGAGTTTTACGCCCCGTCCTTGCGCCACGCGGCCTGCCCCGCGCCCGGC CATTCTACTTCTCCTTCCTTAATGTGCTGTGCGTCGAAAACAAAGGCGCCCTGGTCTGCTGTATTCCCGGGGCCCCGATTGTGCGACTGCCCTCGAATTC GCTCTGATAAACGCAACGTCCACAAAACCAACAAGAAATTGGAGACAGACCGTTCATGAAGACCCCGATCCGTTTTACCGCGCTGGCCCTGTCCATGATG CTGGCCAGCGGTTTTGCCACGGCTGCCGATCTCAAGGTGGGTGTGAGCATGTCCGCATTCGATGACACCTTCCTGACCTACCTGCGCGAAGACATGGACA
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| Amino Acid Sequence |
>oxidoreductase
MRIGLVGYGHGGRFFHAPLIATLPGAAFVGVVTRSPERRQQLSTDLPGVKAFDSIGQIVEAGVDALVISTTLKGRPALVLEAIEHGVAVVSDKPFAANAE QAQALITAAERQGVLLSVYQNRRWDSDYLTLRKLIDAGALGTITRFESRVERYSPQAVGNASGGGWLRDLGSHLVDQALQLFGPVDRVFAQLQFTPQHPT LDHGFFVALTHANGVISHLWGSALQNSQAPRFRVSGTLGCYTVDGLDGQEEALMAGKSPKTEGEHWGAEEHRRWGWFEQGPERERVPSEKGCWTQFYRQL QAAVQGRGPLPVDAYDALETTRLLDAARLSAERQQVVSTKME
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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