Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTAGTCGTCCAGTCTGCCGATGCAGACTTCGTGTTCGCCGCTGTGAACTCTGCACAATCGAATACCGGTAACCTGGTGATCAACAGCGGTACCAAAAACA ATGCGTCCCTCAACGATAGCGGTAACAACGCTTCGGGCATCATTCAGTTGAACGCCGCAGCGGGCACGTCCAACCAAGCCAGCAACAGCACTGTCGTTCA ATCGAACAAAGATGGCTCTGGCGGCCTCGCAACCGTCAATGGTGTGCAGGAAGTTAGCAGCAACCTGACCCTCAATATCAGCAGCGGCCACAGCTGGAGC ACCAAACCTGTTGTCAACAACGCCAGCGTGAACAACTCGATGAACTACAGCTCTGGGGTGTCGAACTCTAACGTTCTGTCGGGCAGCAACAACCAAGGTC AGAACAACGTTGTGGTCCAATCCACCACTCGCTTCTGATCCAGATCGGGCCTTGGCAACAAGGCCCTTTTTATTTCCAGTGTCCAACAGGTCATACGATC
|
|
DNA Sequence for Gene |
>U771_18305
ATGCGCCTCGTCGCCTTCTGCCTGCTGCTAGCACTCACCGGCCCAACCTGGGCAGGACAATTGGCCGTGGTCATGCCCGGCGGTGGGTTGATCTACAAAA AGGTCGAAAGCATTCGCGAGCGCAAATTCGCCAACCTGGTGGAACAGAAAACCGACTTCAGCTGCGGTGCCGCCGCACTCGCCACCATCCTGCGCCAAGC CTATTGGATGGACGTGGACGAAGACCACGTCATCAAGGGCATGCTGCTCAACGCCGACCAGGATCTGGTGCGTACCCAGGGCTTCTCCATGCTCGACATG AAGCGCTACCTGGAAAGCATCCACATGCGTGCCAGGGGCTATCGGATCACTCCAGAAGTGCTGATTACCGTGAAAGTGCCCGTTGTAGTGCTGCTGGACA TTCGCGGCTACAAACATTTCGTGGTGTTGCAGCGCGCCGATAAGGACTGGGTGTACATCGGCGACCCCGTGCTGGGTCACAAGCGTTATGCCAAAGACGA TTTCATCAAAGGCTGGAACGGCATCGTCTTCGCCGTACTGGGTGAAGGCTACGACAAAGCCAATGCCCTGCTCGACCCGCCCACGCCGCTGACCGCCAAG AAACAGTTGAACGAGTTCAGCCCGGTACGCGACAGCGAATTGATGGATTTCGGTTTTATCTCGAGCGACTTCTTCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAGCGCAAGAAGGAGCAGACGATGAACACTCTCCGTTGGCTGACAGTCATGTGCCTGGCAGCCTCAGCACCTGTGTATGCCTCGTCGGCGTTCAAGCCGA TCGAACTCAAGGATTCGGAAATGGCCGAGCTGCGCGGCCGCTATGTGATGCCGGGGCGGATTATCAGCTTTGGCATTGTGATGAGCAGTACCTGGACCAA TGCTGCCGGTGCAACGGTCACCGGCACCGCCAACATGCAAGTCAACTCGTCCACTGTCACCCCGCAGTTTTACGTACAGATTACCGGCAACGATGGTTCC GGAGTGGTCAAGCAACCTCAAGGCACTGGCACGGTGGTCGGCGGCGCAGGGCTCGGTACAGGCCAGGGCGTGGTCCAGACGGTGCGGGCCGCGGGTGACG GCAACACGGCCACCAACGGTGTCGACATCAACGTCACCAAAAACGGCTTGGCCCCCGCCAACTACGTACAGTCAGGGCAGGCCCTGGTGGCAGGCCAGTC
|
|
Amino Acid Sequence |
>peptidase C39
MRLVAFCLLLALTGPTWAGQLAVVMPGGGLIYKKVESIRERKFANLVEQKTDFSCGAAALATILRQAYWMDVDEDHVIKGMLLNADQDLVRTQGFSMLDM KRYLESIHMRARGYRITPEVLITVKVPVVVLLDIRGYKHFVVLQRADKDWVYIGDPVLGHKRYAKDDFIKGWNGIVFAVLGEGYDKANALLDPPTPLTAK KQLNEFSPVRDSELMDFGFISSDFF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|