Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAGGGCCGGCGAACAGGGCCGTGGTTTCGCGGTGGTGGCCGACGAAGTCAGGCACCTGGCGAGTAACACCCAGAGCTCGGTCGAACAGGTACGCACGGTG ATCGAAACCTTGCAACAGCTGAGCCAGGATGTGGTGCACAGCACCCAACTAAGCCGCGAACAAGCCGGCGGCAGCGTGATCCAGGTACAACAAACCCGGG TGGCGCTGGAGAGCATTTCGAAGGCCGTGGATGTGATCGAACAGATGAATCAGCAGATCGCCAGCGCGGCACTGGAGCAAAGTGGCGTGATAGACGATAT CAGCCATCGGGTCAGTGACATTCGTGGCATCAGCGAAACACTCGCCGGCCGGATGAACGAGGCGTCGGAGGCCAGTGATTTACTGCATCAAATGGCCAAT CACCAGCAGCAACTGGTCAGGCACTTCCGCGTGTAAAGGGTATGTCGCCTGACTGAGCTACAGTGGCCGCCCTCCCATTCGCCTTCAATGAGCACCACCC
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DNA Sequence for Gene |
>U771_16435
ATGACTTTTTCACGCCGCTGGCTGATCCTCGCGATTATTTCCAGCGCATTGCTGCTTATCGTCATCGACATGACGGTGCTCTACACCGCCCTGCCCACGC TGACCCGAGAGCTGAATGCTTCAGCCTCGGAAAAGCTCTGGATCGTCAACATCTATGCGCTGATCGCCGCTGGCCTGCTGCTGGGCATGGGGACACTCGG TGACCGTCTCGGGCACAAACGCCTGTTCATCGGCGGGCTCGGTGTGTTCGGCCTGTTCTCGCTGATGGCGGCGTTTTCAACCTCCGCCGCTGTATTGATC GGTGCACGTGGTTTCCTCGCAGTCGGCGCGTCGATGATGATGCCCGCCACGCTGGCGATCGTGCGGGTGACGTTCACCGACCCGCGTGAACAGGCCATGG CGTTCGGCATCTGGGCCTCGGTGGCGTCAGGCGGCGCGGCGTTCGGCCCGGTGATCGGCGGTTTGCTGCTGGAGCATTTCTGGTGGGGCTCGGTGTTCCT GATCAACGTGCCGATTGTGCTGGTCGCGTTGGTCGTCGGCGCGCTATTGATCCCGAATAACCCCGGGGATGCGAGCAAACGCTGGGACTGGCTGGGATCG CTGCAGGTGATGATCGGCTTGATCAGCGTAGCGTATGCGGTGAAGGAACTCGGCAAGCGCACGCCCTCTTTCGAAGGCATGCTGATCGCACTGGTGCTGG GCGCGCTGTTCCTGACGCTATTCATTCGGCGCCAGCGCCGCGCGATCCAACCGATGCTCGACCTGGCGCTGTTCAGTTCCTCCGGTTTCAGGAACGCGGT GATTGCGGCGGTTGTGTCGGCTGCTGCGTTGATCGGCATGGAGCTGGTGTTCAGCCAACGCCTGCAACTGGTGCTGGGCCTGTCGCCACTGGAAGCCGCA TTGTTCATCCTCCCGCTACCGCTGGGCTCGTTTATCTCCGGGCCGCTTGCCGGTTACTACCTGCCTCGCCTGGGGAACCAGCGGATGCTGTTCTGGACGC TGCTGCTATCCGCGGCGTCGATGCTGGCTTACCTGCTGTTGTATGAGGCGGCGGTGTACCTGCAACTGATCGTTCTTGGGCTGCTGGGGCTTACCATTGG CGCAGCACTGACGGCGTCGTCCAGCACCATCATGCTCAGCGTACCGGCCGATCAGGCCGGCATGGCCGCCTCCGTCGAGGAGGTGTCGTTTGAATTGGGC GGTGCCGTCGGTGTGACGCTGTCGGGCAGCCTGTTGTCGGCGATTTATGCGTACTCGGCGGGCCTGGCGATTCCAGCGTGGCTGAGCCGCAATCCCGCGA CATTCGACAGTCTGGACGATGCGCTGGTGGTCGCCGAAACCTTGTCGCCCGAAGGCGCCGCGATGCTGCGCGCATTCGCCCGCTCGGCATTCGATGCGGG CTTTGTTGCGGTGCTGGTGGCGTCGGCAGCGCTGCTTTTGATCGCAGCGCTGCTGGTCAAGCTGAGCCATCAACCACCGCGGGCCGCGCCTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCTTGTGGCTGCCCAAGGCCAGGAACCGCTCTGGCGATGCCTTGCGCAACCGCGCCGCGAGGAATACGCCGCCCAGCAAGGCCAATGGAATAATCGCGC AGAGACTGTAGGACAGCAATCGGCTGGCGCCGGTGAGCACGTCGAAATGCACCACGGCAAGGATCAGCACTGCCAACAGGGCCAGGCAAGAGAAACCGGG GAAAATCTGCCCACGCCAAACCCCGACCTTGAGCTGCGGTTGACCTCGGAAGTACATCAGCACCGCTGCCGAAGTGAGCGCCATCAGCAAAATCACGCAG AGCGTGGCCAGGTTGGACAGCCAGGCAAACAGTTGCAGGATCGGATCGGCATCCAGCGCAGCGAAAATCAGCACCACCACGGCCGAGATCAGGCTCTGCA ACGCCGAGCCCATATGCGGGCTCTGGTGCACGCGGTGGGTCGTGCCTAACTGGCTGTGCAGCAAACCGTCACGGCCGATCGCATAGAAGTAGCGCGCGGC
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Amino Acid Sequence |
>MFS transporter
MTFSRRWLILAIISSALLLIVIDMTVLYTALPTLTRELNASASEKLWIVNIYALIAAGLLLGMGTLGDRLGHKRLFIGGLGVFGLFSLMAAFSTSAAVLI GARGFLAVGASMMMPATLAIVRVTFTDPREQAMAFGIWASVASGGAAFGPVIGGLLLEHFWWGSVFLINVPIVLVALVVGALLIPNNPGDASKRWDWLGS LQVMIGLISVAYAVKELGKRTPSFEGMLIALVLGALFLTLFIRRQRRAIQPMLDLALFSSSGFRNAVIAAVVSAAALIGMELVFSQRLQLVLGLSPLEAA LFILPLPLGSFISGPLAGYYLPRLGNQRMLFWTLLLSAASMLAYLLLYEAAVYLQLIVLGLLGLTIGAALTASSSTIMLSVPADQAGMAASVEEVSFELG GAVGVTLSGSLLSAIYAYSAGLAIPAWLSRNPATFDSLDDALVVAETLSPEGAAMLRAFARSAFDAGFVAVLVASAALLLIAALLVKLSHQPPRAAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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