Pseudomonas sp. TKP, U771_15720
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGTAGTGAAATGGCCGTAGCCACGGTCGTAATCCCGTGCAATGCCAGCCAGCGTGCGCAATTGCCCGGCACTCAAGGTGCCGTAGGGGATTGCCACAC GCAGCATGTAGGCATGCTTTTGCAGGTACAGGCCGTTTTGCAGGCGCAGGGGCAGGAACTCCTCCTCGCTCAGGTCGCCGGCGATAAAGCGTTCCACCTG ATCACGAAATTGCGCCACGCGCTCGAACACCAACGCCCGGTCGTATGCGTCGTATTGGTACATATCACTGCCTCATCAGGGTGGGCCGCATCCACGGTGC GGCTTCTATGGCACGACTATGCACCTGCGGCGCAGCGCGTTATAGATTCACATCCAGCGATAAAAAGCGGATCAGATGGCCTTAGAGCAGCGTTTTCAGG CTGGATGAACTGATCCGCAGTAATGAGGTTTTTCTGAGTCTGTTTTGTTTTGCCCACGCTTCCTACAGTGCCGCCACTTGGAACCGTGGGAGGACTGAGC
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| DNA Sequence for Gene |
>U771_15720
ATGACTACAGCAACAACCGGACAGGCCTATAACTATAAAGTCGTCCGCCAATTCGTGATCGCCACCCTCGTGTGGGGCGTGGTGGGCATGGCCATGGGCG TCTGGATCGCCTCGCAACTGGTCTGGCCCGAGATGAACCTTGACCTGCCCTGGACCACCTTTGGTCGCCTGCGACCGCTGCACACCAGCCTGGTGATCTT CGGTTTTGCCGGCAGTGCGCAATTTGCCGCCAGTTACTACGCGGTACAACGCACCTGCCAGGTTCGGCTGTTTTCCGACACGCTGGCCGCATTCACCTTC TGGGGCTGGCAGTCAGTGATCGTGATCATGCTGGTCAGCCTGCCACTGGGTTACACCACCACCAAGGAATACGCCGAGATCGAGTTCTCCGGCGCGGTGT GGATGACCGTGGTGTGGGTGGCCTATGCCATTGTGTTTTTCACCACCGTGGTGCGGCGCAAGACCGCGCATATCTACGTGGGCAACTGGTTCTTCGGCGC GTTTATCCTGGTGATCGCGATGCTGCACGTGGTCAATCACCTGGCGATCCCGGTGGACTGGTTCAAGTCCTATCCGGTCTACGCCGGGGCCACCGACGCG ATGGTGCAATGGTGGTACGGACATAACGCCGTAGGCTTTTTCCTGACTACCGGTTTTCTCGGGATGATGTACTACTTCGTGCCCAAACAAGTCGGGCGTC CGGTGTATTCCTATCGCCTGTCCATCGTGCACTTCTGGGCGTTGATCACCCTGTATATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCGGA CTGGGCACAGTCGCTGGGCATGGCGATGTCATTGATCCTGCTGGCGCCAAGCTGGGGCGGCATGATCAACGGCATGATGACCTTGTCCGGCGCCTGGCAT AAGTTACGCACCGACCCGATCCTGCGCTTTTTGGTGTTGTCGCTTGCGTTCTACGGCATGTCGACCTTCGAGGGCCCGATGATGGCGATCAAGACGGTCA ACGCGCTCTCCCACTACACCGACTGGACCATCGGCCACGTCCACGCCGGAGCCTTGGGCTGGGTGGCGATGATTACCTTTGGCGCGCTCTACCACATGAT CCCCAAGGTATTCGGGCGTGAACAAATGCACAGCGTGCCCCTGATCAACCTGCACTTCTGGTTGGCGACCATCGGCACGGTGTTGTACATCGCCTCGATG TGGGTCAACGGTATCACCCAGGGCTTGATGTGGCGGGCGGTGAACGATGACGGCACGCTCACCTACTCGTTTGTCGAAGCCTTGCAGGCCAGCCACCCCG GCTTTGTGGTGCGTTTTGCCGGCGGCTTGTTCTTTCTCAGCGGCATGCTGCTGATGGCCTACAACACCTGGCGCACGGTGCGGGTCGCCGACTTGCATGT GGCCCAGCTCGATGCGCGGATCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATGTGGAGTTTCCTCATACTGATATGCCTGTATGGCGCGGTGGAGTACTGCCTGCGCGGGCAGACCAACGAGAGCCTGGATGAGGCCAGTCTGATTCCC TTTGCCGACGACCCGGAAGTGGCACGGCGGGTGGAGCTGGCCACGGGAAAACCGGTCCACGCGGTGGCACCGGAAACCGCCCGGCCGGGCTGGATCAACC TGGACATGTGAAACTGCTCCGGTCATTTGCTCGGCAACTGCGTATGACTATTCGGCGACCGATGAGTAAGGTGGGGCGACATTCCTTGTCAGGAGCATCG CATGCGCACCATCGGCCTTATCGGCGGCATGAGCTGGGAGTCCAGCGCCGAGTACTACCGCATCATCAACCAGCACGTGCGCGACCAGCTCGGCCCGCTG CGCTCGGCGCAATTGTTGATGTACAGCGTGGACTTCGGCCCGGTGGAACAGGCCCAGCATGCCGGGCGTTGGGACGACGCCGCGCTGATCCTGGAAGCTG
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| Amino Acid Sequence |
>cytochrome oxidase subunit I
MTTATTGQAYNYKVVRQFVIATLVWGVVGMAMGVWIASQLVWPEMNLDLPWTTFGRLRPLHTSLVIFGFAGSAQFAASYYAVQRTCQVRLFSDTLAAFTF WGWQSVIVIMLVSLPLGYTTTKEYAEIEFSGAVWMTVVWVAYAIVFFTTVVRRKTAHIYVGNWFFGAFILVIAMLHVVNHLAIPVDWFKSYPVYAGATDA MVQWWYGHNAVGFFLTTGFLGMMYYFVPKQVGRPVYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMAMSLILLAPSWGGMINGMMTLSGAWH KLRTDPILRFLVLSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMITFGALYHMIPKVFGREQMHSVPLINLHFWLATIGTVLYIASM WVNGITQGLMWRAVNDDGTLTYSFVEALQASHPGFVVRFAGGLFFLSGMLLMAYNTWRTVRVADLHVAQLDARIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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