Pseudomonas sp. TKP, U771_09585
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCACAACCAGCACGTAGAGAATAGTAGGCACCAATCCCGCAATTGCTCAAGGCGCGCTCGTCATCCCTGCCACTGGTGGATATAGAAAGAGCCTCGATC AACCGGTGACCGATAGCCTGAACATTGCCGGCAGTTGAACCTTGAGACGAACTGCCGCTCTTAAAGTCACCTCTACATGCGCAAAAGATGCCTGGGGCGG TAACGGCGACCGGAACGAAAGTGTCAGCTTCTTTATATAAATCTTCATCTATTTACAAGGCCTAACGCATGCGGGGCGGCGATTTCAGCCCGGCCTCAAT CCTCCTGCGACTGCAAAAAATTGAACACTTTTTATACAAACTGCCAAAAGATTAGCCAAAATAGATTCGGCACAAGAATTTTTTTTGCTTCTTGCGCTAC GTCAGTTTACTTACTACAAGTAATGGGTAGTATGTACGCCGGCTATTAGCTCACCCTGAGAAAGTAGCCATTTAATAGAAAGTCCTTGAAGGGGAACACG
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| DNA Sequence for Gene |
>U771_09585
ATGAACAACGTTCTGAAATTCTCTGCTCTGGCTCTGGCCGCAGTTCTGGCTACCGGTTGCAGCAGCGTCTCCAAAGAAACCGAAGCTCGTCTGACTGCAA CTGAAGACGCAGCAGCTCGCTCCCAGGCTCGTGCAGACGAAGCCTACCGTAAAGCTGATGAAGCTCTGGCTGCTGCTCAAAAAGCACAACAGACTGCTGA CGAAGCTAACGAGCGCGCTCTGCGCATGCTTGAAAAAGCAAGCAAGAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAATCCTTCGGGGTTGTTATCAAGCCGATCCATTTTTGGATCGGCTTTTTTATTGCCTGAATTTCACGCTCCCGGCGGGAACAGGCAATAAAAATCCCGC CCCGGCGCAAGGCCGAAGCGGGATTTGGGTCAAGCAGGCTTACTGCTGCAGGTCGATCGGCGTGCTCGACACCATCGGCGCTGCGCTCGGCACACCGATC TCAGTCGGCAGGCCATCTTCGGCAGCCACCACATCACGCACCTGATCCCAGTTCACCCGCAGGTGATTGGCCAGGTCTTCACGCTTGAGCAGGGCGTTGA TCACCGCCGTATGCTTGTCGACCACCGAAGGGGTGCCGTCGTCGTTCAGGGGCGTATGCGCTTCCAGGTACACCTTGCCACCGCGGCTGCCGAACTTGTA GGCATCGTTGATGATGCGCACCGACGTGCCCACCGGCACCATGCTGGCCATCTCCAGCACGTTGTTGTTGAACATGCGGAAGCAGCCATGGCTGGTACGC
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| Amino Acid Sequence |
>Major outer membrane lipoprotein
MNNVLKFSALALAAVLATGCSSVSKETEARLTATEDAAARSQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKASKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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