Pseudomonas sp. TKP, U771_08175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00701
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psk01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psk00300 Lysine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psk00261 Monobactam biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psk01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psk01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psk01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psk01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00408 DHDPS-like - - 9 289 2.68979E-97
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 1 290 3.3E-78
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 7 289 3.4E-53
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 133 150 6.6E-12
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 5 290 4.5E-85
PANTHER PTHR12128 DIHYDRODIPICOLINATE SYNTHASE IPR002220 DapA-like 6 287 1.8E-55
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 40 61 6.6E-12
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 76 94 6.6E-12
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 108 124 6.6E-12
SMART SM01130 DHDPS_2 IPR002220 DapA-like 5 289 1.9E-93
SUPERFAMILY SSF51569 Aldolase - - 3 289 2.09E-83

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.