Pseudomonas sp. TKP, U771_06860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCCCTGCTGGCCGGTGAAGAGGCCAAGGCCAAGAAGCCGGATGACTGGGTCATTACCGGTACACCGCAGTCCTTTGAAGCCTATGCCTGCATGGTTC GCAAAGACGACCCAGCCTTCAAGAAAGCCGTGGATGACGCCATTGTCGGCCTGTACAAGTCCGGCGAAATCAACAAGATCTACGCCAAGTGGTTCGAAAG CCCGATCCCACCAAAAGGTCTGAACCTTAACTTCCCGATGAGCGAAAAGGTCAAGGAACTGATCAAGAACCCGACCGACAAGCCGGCGCCGGAAGTAAAG ATCTAAATACTGACTAACCTTATCTCCTGAGGGAGCCAACGCTCCCTCAGGCGTCTGTTACTACCTGCTGGCTGTATTTTGGAACACTCGACCTGGCGGT TTTCGAGCCGATCGCGTGTGCCTGACGTTCGTCGTCAGGCGGGAAAGGATCTTCCCCAAGCGGGTGCTTGTACATCGATCGATCTCGAGGGGAGACCCTA
|
|
| DNA Sequence for Gene |
>U771_06860
ATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTGGGCAGCGAGACTTATCTCGACTGGTACATCGCCGGCCTGGGCTGGACCATCG CCATCGCTGTCGTGGCATGGATTATCGCCTTGCTGCTGGGGTCCATTCTGGGCGTCATGCGCACCGTGCCAAACCGTCTCGTATCGGGCATCGCGACCTG CTACGTGGAACTGTTTCGTAACGTACCGCTGCTGGTGCAGCTGTTCATTTGGTACTTCCTGATACCCGACCTGCTGCCGCAGAACCTGCAGGACTGGTAC AAGCAGGACCTCAACCCGACCACCTCGGCCTACCTGAGCGTTGTCGTGTGCCTGGGCCTGTTCACCGCCGCCCGTGTGTGTGAACAGGTGCGCACCGGCA TCCAGGCGCTGCCACGTGGCCAAGAAGCGGCCGCACGCGCCATGGGCTTCAAGCTGCCGCAGATCTACTGGAACGTGCTGCTGCCCCAGGCCTACCGGAT CATCATTCCGCCGCTTACCTCGGAATTCCTCAACGTGTTCAAGAACTCCTCCGTGGCGTCCTTGATCGGCCTGATGGAACTGCTGGCGCAAACCAAGCAG ACCGCCGAGTTCTCGGCCAACCTGTTCGAGGCCTTCACCCTGGCCACGCTGATCTACTTCACCCTGAACATGAGCCTGATGCTGCTGATGCGCGTGGTCG AGAAGAAAGTCGCAGTGCCCGGCCTGATCTCCGTGGGGGGTAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGAATTCGATTTCAGCGGCATCATCCCCGCCATCCCGGGCCTGTGGAACGGCATGGTCATGACCTTGAAGCTGATGGTCATGGGCGTGGTCGGCGGCAT CATCATCGGCACCGTCCTGGCCCTGATGCGCCTGTCGTCCAACAAGCTGTTGTCCCGCGTGGCCGGCGCCTATGTGAACTACTTCCGTTCGATCCCGCTG CTGCTGGTGATCACCTGGTTCTACCTGGCGGTACCGTTCGTACTGCGCTGGATCACCGGCCAGGACACGCCAATCGGGGCATTCACCTCCTGCGTCGTGG CGTTCATGATGTTCGAGGCGGCGTACTTCTGCGAGATCGTACGGGCCGGCGTGCAGTCGATCCCCAAGGGCCAGATGGCCGCCGCACAAGCGATGGGCAT GACCTACGGCCAGACCATGCGCCTGATCATCCTGCCCCAGGCGTTCCGCAAGATGACCCCGTTGCTGCTGCAACAGAGCATCATCCTGTTCCAGGACACC
|
|
| Amino Acid Sequence |
>amino acid ABC transporter permease
MNYNWDWGVFFKSTGVGSETYLDWYIAGLGWTIAIAVVAWIIALLLGSILGVMRTVPNRLVSGIATCYVELFRNVPLLVQLFIWYFLIPDLLPQNLQDWY KQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQEAAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ TAEFSANLFEAFTLATLIYFTLNMSLMLLMRVVEKKVAVPGLISVGGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|