Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCGACCTCCGCCCTCGACCCGGAAATGGTCAACGAAGTGCTGGACGTGATGGTGCAACTGGCCCAGGAAGGCATGACCATGATGTGTGTGACCCACGAAA TGGGCTTCGCCCGCAAAGTGGCCGACCGCGTGATCTTCATGGACGCCGGCAAGATCATCGAAGACTGCCCGAAAGAAGAATTCTTCGGCGACATCAGCGC CCGCTCCGAGCGTGCGCAGCACTTCCTTGAGAAAATCCTGCAGCACTAAAAACAGCAGCGCTCCCTTCTGCGAGGGCGGGCGGTCTTGTGGTGGCGAGCG GGCTTGTTGTGGCGAGCGGGCTTGCCCCGCGTTGGGCCGCGGAGCGGCCCCAAACCAGCTACTGAGGATTGCCTGACACACCGCATTCCTCAGTACTGGG GCCGCTTCGCGGCCCAACGCGGGGCAAGCCCGCTCGCCACAATCAGTCCGCTCGCAGCAGGACAAACATCGTCACCATAACTGGTTGACCCAAGGCATCT
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DNA Sequence for Gene |
>U771_06845
GTGATGAAATGCGACCCCAACCTCTATCGCGCCGCGCCGCCATCACTTGCCGTGAAGCCCCGCCTGATTCGCCAACTGTTCCTGCCGCCGTTGATCATCG CCCTGATGGTCGGCCTGGGTTACATCGGCTTCTGGATCAGTGAGTACTACGGTATCCGCACCCTCAGCGATACCGGCGAGCGCCAACTGGAGTTGCACGC CCGCACGGTCGAAAGTGAACTGAGCAAATACACCTACCTGCCCAGCCTCCTGGAACTGGAATCCAGTGTCTCCAAGCTGCTGGCCGACCCAAACCAGGAA ACCCGCAAAACCGTCAACGACTACCTCGAAGGCCTGAACCGACGCAGCCGCAGCCGGGCCATCTACGTGATGGACACCACCGGCAGGGTGCTGGCCACCA GCAACTGGCGCGACGCCGACAGCTACCAGGGTGAAGACCTGTCCTTCCGGGCCTATTTCCAGAACGCGGTACGCGGCCAGCCAGGGCGTTTCTACGGCAT CGGCAGCACCAACGGCGAACCCGGCTACTACCTGGCCCACGGCCTGGAAGAGCACGGCAAGATCATCGGCGTCGCCGTGGTCAAGGTGCGCCTCGAAGCC TTGGAAGAACGCTGGCAGCGCGCACGCCTCGAAGCATTTGTCAGCGATGAGAACGGCATCATCATCCTCTCCAGCGACCCGGCCCGCCGCCTCAAGGCCG TGCGACCGCTGAGTGACGAGACCAAGGAACGCCTGGCCCACAGCCTGCAATATTACTGGGCCACGCTCAACGAACTGGAACCCCTGGCCCGCGAGCGCCT CAACGAAGGCACCGAAAAACTGACCTTCCCGGCCAACAGCGAAGTGGTGGCGGACGAGCGGGAGGTCAGCTACCTCGCCCAGACTCGACCGCTGAGCGAC ACACCCTGGAATTTCACCCTGCTCACCCCGCTCAACGACCTGCGCCGCGCCGCAATCAACCAGGGCATCCTGGTGGCCGTCGCCTTTGGCCTGGTGGCAT TCCTGTTGATTGCCTGGAACGAGCGGCGCAAAGTCATCGCCACCCGCCTCGCCGCTCGGGAGGCATTGCAGGAAGCCAACAGCCAGCTGGAACGTCGGAT TGCCGAACGTACCGCCGACCTGCGCGCCAGCAACGAACGGCTCAAGGGCCAGATTCGCGAACGGCGCCAGGCCGAAGAGACCCTGCGCCGCGCCCAGGAT GAACTGGTGCAGGCCGGCAAGCTCGCCGCCATCGGCCAGATGTCCACCAGCATCGCCCACGAACTGAACCAACCCCTGGCCGCGCTGCGCACGTTGTCCG GCAACACGGTGCGCTTCCTCGAACGCGGGGCGCTGGATACCGCCAGCGCCAACCTCAAGACCATCAACGAACTGATCGACCGCATGGGCCGCATCACCGC CAGCCTGCGCTCCTTTGCCCGGCGGGGCGATGACCAGGGCGAAGCCAACCTGGGCAAGGCCGTGGACGCCGCGTTCCAGGTGCTCGGCGCACGCCTGGAC AGCCTGCCGCTGACCCTGCACCGCGACTTCTCCCCTGCCCTTTTGCAGATCGACCAGACGCGCCTGGAACAGATCCTGGTCAACCTGATCGGCAATGCCC TCGATGCGATGCAGGCACAACCTGCCCCCGAACTGTGGCTCGAAGGCAGCAGCGCCGACGGTAAATATCGCCTGCTTGTGCGCGACAACGGCCACGGCAT CGACCCCGAGGCACGCAAGCATCTGTTCGAACCGTTCTTCACCACCAAACCCGGCGAGCAAGGCCTCGGCCTGGGCCTGACCCTGTCCGCCAGCCTCGCG GCGGCCACGGGTGGCAACCTCGCCGTGGAACACCCAGCCAGTGGTGGTACGGCCTTTGTCCTCTGCCTGCCTTTGGCGGGCGCTCAAAAAACTGAGTCGA CATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGTAGAAAAAAACACTGACCTGACCGTCCTGATCGTCGAAGACGACCCCCATGTGCTGCTCGGCTGCCAGCAAGCCTTCGCGCTGGAGGACATCCCCAG CGTCGGTGTGGCCAGTGCCGAAGAGGCGTTGAAGCACGTCGACGAAAACTTTGCCGGCATCGTCATCAGCGATATTCGCCTGCCGGGCATCGACGGCCTG GAACTGCTGACCCGCCTCAAGGCCCTGGATAAAAGCCTGCCGGTGGTGCTGATCACCGGGCATGGCGATATCTCCATGGCTGTCGGCGCCATGCGCAACG GCGCCTACGACTTCATGGAAAAGCCCTTCTCCCCCGAGCGCCTGGTCGATGTGGCCCGCCGCGCCCTGGAACAACGCGGGCTGGCGCGGGAAGTCTGGTC GCTGCGCCGCCAGTTGGCCGAGCGCGATTCCCTTGAAGGCCGCATCATCGGCCGTTCGCCGGCCATGCAGAACCTGCGCGAATTGATCGCCAACGTCGCC
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Amino Acid Sequence |
>sensor histidine kinase
MMKCDPNLYRAAPPSLAVKPRLIRQLFLPPLIIALMVGLGYIGFWISEYYGIRTLSDTGERQLELHARTVESELSKYTYLPSLLELESSVSKLLADPNQE TRKTVNDYLEGLNRRSRSRAIYVMDTTGRVLATSNWRDADSYQGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRLEA LEERWQRARLEAFVSDENGIIILSSDPARRLKAVRPLSDETKERLAHSLQYYWATLNELEPLARERLNEGTEKLTFPANSEVVADEREVSYLAQTRPLSD TPWNFTLLTPLNDLRRAAINQGILVAVAFGLVAFLLIAWNERRKVIATRLAAREALQEANSQLERRIAERTADLRASNERLKGQIRERRQAEETLRRAQD ELVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALDTASANLKTINELIDRMGRITASLRSFARRGDDQGEANLGKAVDAAFQVLGARLD SLPLTLHRDFSPALLQIDQTRLEQILVNLIGNALDAMQAQPAPELWLEGSSADGKYRLLVRDNGHGIDPEARKHLFEPFFTTKPGEQGLGLGLTLSASLA AATGGNLAVEHPASGGTAFVLCLPLAGAQKTEST
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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