Pseudomonas sp. TKP, U771_06565
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCAACCCTGTCCAACCGGCCAGCGCCGCTGCCGCCACATACCGCTTCATGTCATCAGTCCAGCGGGCGTTTGGTGCGCATCAACTTGACGTACAACCC TTCGACTTTTTCGCGCGCCCAGGGGGTCTTGCGCAGGAAGGTGAGGCTGGACTTGATGCTCGGGTCGCTCTTGAAGCAGCGGATATCAATGCGCTCGGCG AGGCCCGCCCATTCGTAATGTTCCACCAGGGTGGTGAGGACGTGCTGAAGGGTCACGCCGTGGAGGGGGTCGTTGCTTGTCGCGGTCATGCCGGGCCTTT TGCAAAAAGAGGAAACACAGCCGCGCACCTTAGCCGACGGGGCGTACAGGTGGAAGCACCGCATTGAATATAGCCCCTGGGAAAAAGTTCCCCTTTTCAG CCAAAAAAGAGATGTTATATTGTAACAATAATTACCAAAATCCAGCCTTTCACTACCGTTTCAGCCTTCTCTTTTTTGCTGTTTTGCCAAGGAATGTATG
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| DNA Sequence for Gene |
>U771_06565
ATGTCCCGCTCCCCTCTCTGGCGCCTGTCCCCCCTGGCCGCCGCCCTGTTGATCAGCGCCGAAGCCCACGCCCTGGAACTGCCCTCCCAGGTCATCACCG GCAACCCGCTGGGCAACGAACAACTCGCGTCGCCGACCACCGTGCTCGAAGGCGATAACCTGACCCTGCAACAAAAAGGCAGCCTCGGCGAAACCCTGAA CAAGCAGCCGGGTGTGTCGTCGTCCTACTTTGGCCCCGGTGCCAGCCGGCCGATCATTCGCGGCCAGGACGGCGACCGCATTCGCCTCCTGCGCAATGGC GTCGGCGCGCTGGACGCGTCGTCACTGTCCTACGACCACGCGGTGCCGCTGGACCCGGTCAACGTCGAGCGCATTGAAATCGTGCGTGGCCCGGCCGCCC TCTTGTATGGCGGCAGCGCCATCGGCGGCGTGGTCAATACCTTCGACAACCGCATCCCCACCGAAGCCATCGAAGGCATCCACGGTGCCGGTGAACTGCG CTACGGCGGCGCCGACACCACGCGCAGCAGCGCCGGCAAACTGGAAGCCGGCAATGGCACCTTCGCCCTGCACCTGGACGCCAACGCGCGGGAATTCAAC GACCTGAAAATCCCAGGCTTTGCCCGCAGCCGCCATGCGCCTGAGAACGAAGATGGCCCCGGTAAAAATGGCCGTCTGGGCAACAGTGACGGGCGCCAGG ACGGCGGTGCAGTCGGCGGCTCCTACACCTGGGACGATGGTTACGCCGGGCTGTCCTACAGCAGCTATGACAGTAACTACGGCTCCCCCGCCGAGCAGGA TGTGCGCATCCGCATGAAGCAGGATCACTACGCGTTCGCCTCCGAGATGCGCAACCTGCAAGGCCCGTTTACCTCGGTGAAACTCGACGCCGGCTACACC GACTACGAACACCGCGAAATCGAAGGCGGTGAAACCGGCACGATTTTCAAGAACAAGGGCTATGAAGCGCGGGTTGAAGCGCGCCACCAGCCAATCGGCC CGTTCGACGGCGTGGTCGGCGCGCAAGTGACTCGCAATGAGTTCTCGGCCCTGGGTGAAGAAGCCTTCGTACCGCAAACCGACACCAACGCTGGCGCGCT GTTTATCCTTGAGGACATGCAGGCCACCGAACGCCTGAAACTCAGTCTCGGCGGGCGCCTGGAACACACCCGTGTGGACCCGGACGCCAAAGGCAACGCG CGCTTCGCCAATGCCGACAAGGCCAATGACTTCACCGCCGGCAGCCTGTCGTCCGGGGCGGTCTACACCCTCACACCCGTCTGGTCCGTGGCCGCGACCC TGGGCTACACCGAACGCGCACCGACCTTCTATGAGCTGTACGCCAACGGCGCCCACGTCGCCACCGGCACCTACGAACTGGGCGATGCCAACCTGAAGAA AGAAAAAGCGGTGTCCAGCGACCTGGCGCTGCGCTTTGACAATGGCACCCACAAGGGCAGCTTCGGTGTGTTCTACAGCCGCTTCTCCAACTACATCGGG CTGCTGGGAACGGGTCGTACGCTAAACGACGAAGGCGAAGAAGACGCAGGCGGCATCCCTGAGTATGAATACTCCGGCGTGCGCGCCCGTTTCGCCGGCT TCGAAGCCCAGGATCACTGGAAGCTCGGCGAAAGCGCCTACGGTAAGTTCGCGCTGGAACTGTCGGGCGACTACACCCGCGCCACCAACCTCGACACCGG CGAAGCCTTACCGCGTATTGCACCGCTGCGCTTGAACAGCGGCCTGCTATGGGAACTGGACCGCTGGCAGGCGCGCATCGACCTGGAACATGCCGCAGGC CAAGGCCGTGTGCCAGATAACGAAAGCGGCACCGATGGCTACACCACCCTGGGCGCCAGCGCGGGGTATCGCTTCAATGTGGGAGGCAGCCAGTGGCTGG CGTTCGTCAACGGTGAGAACCTGACCAACCAGACCGTGCGGTACGCCAGCTCGATCCTGCGTGATATCGCACCGGCACCGGGGCGTAGCGTGCAATTCGG CATACGCACCACCTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAAACCCGCGAATCCTACCTGTGGGAGCTGGCGAGCCGGCCTGGTGTGGCAAGCGGATTTGTTGTGCGAGCGGACTTGGTGTGGCGAGCGGGCTTGTTG TGGCGAGCGGGCTTGCCCCGCGTTGGGCTGCGCAGCAGCCCCAAAACCAGGCAACGCGGTGTGTCAGTTAAAAACACATTGCCTGTAATGGGGCCGCTTC GCGCCCCAACGCGGGGCAAGCCCGCTCGCCACAACAAGCCCGCTCGCCACAGGCCAGCCCGATCGCCACAGTTACGGTGTTCTGCCTTAACTGAACGGCA TTCGGGCTTGCCACAATCACTGTTACCAAATCGGAAATGATGCATCTTGCGATTTGCGCTTTCTCTCGGCGCGTCCTCCCATTATCCTTGCCGCAATAAA CTGAAACGTTTCATTCTCCGGTCGACCCCATCTTGCAGAATTCCCCTCGCAACAGAGACAGCGCTGTCTTGCACCGACCTGCGCCTGGGTATAAATCGCC
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| Amino Acid Sequence |
>TonB-denpendent receptor
MSRSPLWRLSPLAAALLISAEAHALELPSQVITGNPLGNEQLASPTTVLEGDNLTLQQKGSLGETLNKQPGVSSSYFGPGASRPIIRGQDGDRIRLLRNG VGALDASSLSYDHAVPLDPVNVERIEIVRGPAALLYGGSAIGGVVNTFDNRIPTEAIEGIHGAGELRYGGADTTRSSAGKLEAGNGTFALHLDANAREFN DLKIPGFARSRHAPENEDGPGKNGRLGNSDGRQDGGAVGGSYTWDDGYAGLSYSSYDSNYGSPAEQDVRIRMKQDHYAFASEMRNLQGPFTSVKLDAGYT DYEHREIEGGETGTIFKNKGYEARVEARHQPIGPFDGVVGAQVTRNEFSALGEEAFVPQTDTNAGALFILEDMQATERLKLSLGGRLEHTRVDPDAKGNA RFANADKANDFTAGSLSSGAVYTLTPVWSVAATLGYTERAPTFYELYANGAHVATGTYELGDANLKKEKAVSSDLALRFDNGTHKGSFGVFYSRFSNYIG LLGTGRTLNDEGEEDAGGIPEYEYSGVRARFAGFEAQDHWKLGESAYGKFALELSGDYTRATNLDTGEALPRIAPLRLNSGLLWELDRWQARIDLEHAAG QGRVPDNESGTDGYTTLGASAGYRFNVGGSQWLAFVNGENLTNQTVRYASSILRDIAPAPGRSVQFGIRTTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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