Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TATGCAGGCGGATCTGGCCCAGGTTGGCCTGAAGGTCAACATCAAGGTCATGGAGTGGGGCGAAATGCTCAAGCGCGCCAAAGCCGGTGAGCACGACATG GTTTCCGCAGGCTGGGTAGGTGATAACGGCGACCCGGATAACTTCCTTACGCCCAACCTGAGTTGCGATGCGGCCAAGAACGGCGAAAACTACGCCCGTT GGTGCAATAAAGAATTTCAGGACCTGATCGACAAGGCGCGTGCCCTCACTGAACCCGCCCAGCGCGCTGCACTCTATGAACAGGCACAGGACGTTTTCGA CAAGGACCAACCATGGCTTCCCATGGCTTACCCGAAACTGTTCACCGCCATGCGCAAAAACGTAGAAGGCTTTACCCAAAGCCCTCTAGGTACCAATAAC TTCGCCACCACCCAGGTGAAGTAAATAAGAAAAACGCTCGGCACCGTCGACCTTGACGGTGCCGGACTTGCCTAACCGGCTGATTGAGGTACACCACAAG
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DNA Sequence for Gene |
>U771_05295
ATGTTTAGTTTTATTGCCCGCCGATTGGGGTTATTGATCCCCACGTTTTTCGGCATCACGTTGCTGACATTTGCGTTGATTCGCATGATCCCCGGCGACC CCGTCGAAGTCATGATGGGCGAGCGACGCGTCGACCCCGAGATGCACGCACAGGCAATGGAACGCCTCGGCCTTAACAAGCCGCTGTATGCGCAATACCT GGACTATGTGGGCAAGCTCGCCCATGGCGACCTTGGCGAATCGCTGCGCACGCGGACCAGCGTGTGGACCGAGTTCACCGCCCTCTTCCCGGCGACCCTG GAACTGTCCATGGCCGCCCTGTTGTTCGCCGGCATCCTGGGCCTGTTGGCCGGGGTGATCGCGGCCCTGAAGCGAGGATCCCTGTTCGACCATGGGGTGA TGGGCATCTCCCTGGCGGGATATTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGTTCTTCTCGGTAAGCCTGGGCTGGACCCCGGTTTCCGG GCGTATCGACCTGCTCTACGACATCGAGCCGCGCACCGGCTTCATGCTGATCGACACCCTGCTGGCTGACGAGCCGGACGCCTTCTGGGATGCGCTGCAC CACCTGATCCTGCCGGCCATCGTGCTCGGCACCATCCCTTTGGCGGTGATCGCGCGGATGACCCGTTCGTCGATGCTCGAAGTGCTGCGCGAAGACTACA TCCGTACCGCCAAGGCCAAAGGCCTGTCGCCTGCACGCGTGGTGTTCGTCCACGGCCTGCGTAACGCGCTGATCCCAGTGCTGACCGTGGTTGGCCTGCA AGTCGGCACCCTGCTGGCCGGTGCGGTTTTGACCGAAACCATCTTCTCGTGGCCCGGCATCGGCAAATGGCTGATCGAAGCCATTGGCGCGCGGGACTAC CCGGTGGTGCAAAACGGCATCCTGCTGATCGCCTGCCTGGTGATCCTGGTGAACTTCGTGGTGGATATCCTCTACGGCTTCGCCAACCCACGCATCCGTC ACCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATCATGACCATGACCACACCTACTCCCGTGTCAGCAGTCGATCAAAGCCTGCTGTATCCGTCCCCGTACAAAGAATTCTGGCAAGCCTTCTCCAAGAAC AAAGGCGCGGTCGCCGGCCTGCTGTTCATGTTGCTGATCGTGTTCTGCGCGCTCTTCGCCCCTTGGGTGGCGCCGCATAACCCGAGCGAGCAGTACCGCG ACTTCCTGCTGACCCCGCCGTCATGGCTGGAAGGCGGGCAGATCCAGTTCCTGCTCGGCACCGACGAACTGGGCCGTGACTTGCTCTCGCGCCTGATCCA GGGTTCGCGCCTGTCGCTGCTGATCGGCTTGTCGTCGGTGGTGATGTCGCTGATCCCGGGCATCCTGCTGGGTCTGTTCGCCGGATTCTTCCCGCGCCTG CTGGGCCCGACCATCATGCGCCTGATGGACATCATGCTGGCCCTGCCGTCCCTGCTGCTGGCGGTTGCCATTGTCGCGATCCTCGGCCCTGGCCTGATCA
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Amino Acid Sequence |
>peptide ABC transporter permease
MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYLDYVGKLAHGDLGESLRTRTSVWTEFTALFPATL ELSMAALLFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPRTGFMLIDTLLADEPDAFWDALH HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAKAKGLSPARVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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