Pseudomonas sp. TKP, U771_03440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009236 | cobalamin biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036428
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008168 | methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF53790
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008276 | protein methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036428
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psk01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psk00860 | Porphyrin and chlorophyll metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PIRSF | PIRSF036428 | CobL_MTase | IPR006365 | Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase | 1 | 401 | 0.0 |
| PANTHER | PTHR43182 | COBALT-PRECORRIN-6B C(15)-METHYLTRANSFERASE (DECARBOXYLATING) | - | - | 3 | 400 | 3.1E-121 |
| NCBIfam | TIGR02469 | JCVI: precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT | IPR014008 | Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit | 230 | 351 | 2.2E-34 |
| Pfam | PF00590 | Tetrapyrrole (Corrin/Porphyrin) Methylases | IPR000878 | Tetrapyrrole methylase | 5 | 188 | 1.5E-16 |
| NCBIfam | TIGR02467 | JCVI: precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE | IPR012818 | Precorrin-6Y methyltransferase | 7 | 201 | 4.2E-43 |
| CDD | cd11644 | Precorrin-6Y-MT | IPR012818 | Precorrin-6Y methyltransferase | 8 | 203 | 1.29525E-62 |
| CDD | cd02440 | AdoMet_MTases | - | - | 252 | 346 | 2.35288E-5 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | 216 | 377 | 9.71E-28 |
| Gene3D | G3DSA:3.40.1010.10 | - | IPR014777 | Tetrapyrrole methylase, subdomain 1 | 4 | 102 | 3.3E-12 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | 213 | 400 | 5.0E-62 |
| SUPERFAMILY | SSF53790 | Tetrapyrrole methylase | IPR035996 | Tetrapyrrole methylase superfamily | 4 | 204 | 1.44E-37 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.