Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCATGACCGCGTATATCTGCGACTACCTGCGCATCATGTCCTCGGGCAACATGGCGCCCCATGAGCTGGAAGGCCTGTTCGACATGGAGCTGTTCAG CCTCAAGGAAGAGCTGGAGCATCCTTCCCACGCGGTGACCGGTGTTGCCGACGGTATGCCTGGTTTCGGTATCGTCGCGGCGGTACTGGGTATCGTGGTG ACCATGGCGTCCCTCGGCGAGGGCGACCAGAAAGCTATCGGTATGCACGTAGGTGCGGCCCTCGTGGGTACCTTCTTCGGTATTCTTGCGGCCTATGGTT TCTTCGGCCCGCTCGCCACCTCCCTGGCCCACGATGCCAAGGAAGAAATCAATCTGTATGAAGCGATCAAGGCCAGCCTGGTCGCTTCGGCATCGGGCAT GCCGCCTTCGCTGGCGGTGGAATTCGGTCGCAAGGTGCTGTACCCGAAACATCGCCCAAGTTTTGCCGAGTTGGAACAAGCGGTTCGCGGTCGCTAAGCC
|
|
DNA Sequence for Gene |
>U771_02975
ATGGAAAACAACCAGCCGATAATCATCAAGCGCGTCAAGCGCTTCGCCGCGGGGCACCATGGTGGCGCCTGGAAAATCGCCTTCGCCGACTTCGCGACGG CGATGATGGCGTTCTTCCTGGTGCTGTGGCTGATGTCCACGGCCACGCCCGAGCAGAAGATCGCCATCGCCGGTTACTTCAAGGACCCGATTGGCTTCTC GGAAAGTGGCACCCCCTTTGTAATCGACCTTGGCGGTTCGCCGCAGTTGGCGCCTGAGCGCACCATCAACCCGGAGGTCAAGACCGAGGCGCCCCAGGAA AAAATTCCGATCGAGCGCGATACCGTCGAGAGCATGGCTGAGCAGGTCGAGCAGGAACGCCTTGAATTGCTGCTGCAGGAATTGCAGACCAAGGTCGAGG AAAACCCTCAACTGCTGAAGTTCAAGGATCAGATTTCCTTCGAGATTACCCCGGAAGGCTTGCGTATCCAGATCACTGACGCCGCGAACCGGCCGATGTT CGACTCCGGCAGCGCGCGCTTGAAGCCGTATTTCGAAGATATCCTGCTGGCCATGGCCGACACCATCAAGGCCGTGCCGAACAAGATCAGTATCAGCGGC CACACCGATGCCAAGCCGTATGCGGGGCAGGGCGACTTCGGCAACTGGGAGCTTTCGGCCAACCGTGCCAACGCTGCTCGCCGTGCACTGGTGGCCGGCA GCTACCCGGACGCGCAAGTGGCACGAGTGGTCGGCTTTGCCTCTTCCCAATTGTTTGATCCGAAAGACCCGTTCAACCCGATCAACCGTCGCATCGATAT CGTTGTGCTGACTAAAAAGGCCCAGCGAGCGATTGAAGGCGATCAGCCACCGCCGCCGCCGACATCCGGCGCAGGCGCGCCAGGTGAAACTCCCGCCGAT CCGAATGCGATTGCGCCTGGGCAGGAGCCATTGCCGGCGCATGAGCTGCGGCAGAAGCTGAACTTGTTTGATGACGGCGGGGTGAAGGATCCTACGGTGC CTGCGACGGGCTCGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCACACCGGATGTTTGTGGTGAGCGAGCCTGTTGTGGGGGAGGGTGCGGGCTTGTTGTGGGATGCGGGCGTGCCCTGATGCCTGTCAGTTAAGGCGGAAC ACTGTAACTGTGGCGAGCGGGCTTGCCCCGCGTTGGGCTGCGAAGCAGCCCCAGAACCCGCCGCAGAGGAGTGCCTGATACTCCGCATTCCGATTGATTG GGGCCGCTTCGCAACCCAACGCGGGGCAAGCCCGCTCGCCACGACAGGCTTGCTCGCCAGATATTGCGTGGGGTGGTCTAGTAACTGCTTTCGGGCAAGC TCGCAATAATCGACCGATAGCTGTTCATCCGCTGCTGCTGCACGCGGCCATCCTCCAGCGCCTTGAGCAAGGCGCAACCGGGCTCGCGGTCGTGTTTGCA ATCGCGGAAGCGGCAAGTGCCGATCAGGTCGTTGAATTCGATAAAGCCGGCTTCTACATCGCTGCGGCTGACGTGGCCGAGGCCGAATTCTCGAATACCT
|
|
Amino Acid Sequence |
>flagellar motor protein MotB
MENNQPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYFKDPIGFSESGTPFVIDLGGSPQLAPERTINPEVKTEAPQE KIPIERDTVESMAEQVEQERLELLLQELQTKVEENPQLLKFKDQISFEITPEGLRIQITDAANRPMFDSGSARLKPYFEDILLAMADTIKAVPNKISISG HTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDAQVARVVGFASSQLFDPKDPFNPINRRIDIVVLTKKAQRAIEGDQPPPPPTSGAGAPGETPAD PNAIAPGQEPLPAHELRQKLNLFDDGGVKDPTVPATGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|