Pseudomonas sp. TKP, U771_02345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCCCCGGCGGTATATCCAACCGTCCCACGTGGTGCGCATTGCGCCGATGATTTATGGCGGCTCGTTCCGCCGCGACTCGAAACTGGCCGCCGAGCAC GCCAGCAAAGTGCGCTCGGCCGGCAAGCTGGGCTACTACTGGCAACTGTTCGCGGGGCTGGGCTGGACCAGCATCCACTGGCTGCACAAGATCCGCCAGC CGACCCTGGTGCTGGCCGGGGACGACGACCCGCTGATCCCGCTGGTCAACATGCGCATGCTGGCCTGGCGCATTCCCAACGCACAGTTGCACATCATCGA TGACGGCCACCTGTTCCTGATCACCCGGGCTGAAGCCGTGGCACCGATCATCATGAAATTTCTCGAGGAGGAGCGCATGCGGGCCGTGATTCACCCGCGA CCAGCGGTGTAAGGACCACACCGCCGCGCAACTTGCCGAGAACCGACTATGGTTCTGAATTGGCGTGCCTGTTGATGGCTTGACGAAGGAGTGTTGGCTC
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| DNA Sequence for Gene |
>U771_02345
ATGCGAGAAAGACCCGTGACGAACCCGGCGCCCACCCCCGCCGCGTTCATCAACGCGCAAAACGCGATCACCGGCCTGCGCGGTCGGGATTTGCTGTCGA CCCTGCGCAGCGTTGCCGCCCACGGCTGGCGTAACCCCCTGCATACCGCCCGTCACGCCCTGGCCCTGGGCGGTCAGTTGGGGCGCGTGCTGCTGGGTGA GACCGTGCATGAGCCCAACCCGCGCGACAGCCGCTTCACGGACCCGACCTGGACGCTCAACCCCTTCTACCGACGCAGCCTGCAGGCCTATCTGAGCTGG CAGAAAGAAGTCCGCCACTGGATCGACGACAGCACCCTGAGCAGCGACGACCGGGCCCGTGCGCACTTTGCCTTCTCGCTGCTCAACGACGCCGTCTCCC CCTCCAACACCCTGCTCAACCCGCTGGCCGTCAAGGAGTTGCTCAACTCCGGCGGCAACAGCGTGGTGCGCGGCGTGAGCAACCTGCTCGACGACCTGCT GCACAACAACGGCCTGCCGCGCCAGGTGACCAAGCAGGCGTTCGAAGTCGGCAAGACCGTGGCCACGACCCCAGGCTCGGTGGTGTTTCGCAATGAGCTG CTGGAGCTGATCCAGTACAAGCCCATGAGCGAAAAACAGTACGCCAAGCCGCTGCTGATCGTGCCGCCGCAAATCAACAAGTACTACATTTTCGACCTGA GCCCGACCAACAGCTTTGTGCAATACGCACTGAAGAACAGCCTGCAAACCTTTATCGTCAGTTGGCGCAACCCGGATGTGCGTCATCGCGAATGGGGCTT GTCCACGTATGTGGCGGCGCTGGAGGAAGCGCTCAACGTCTGCCGGGCCATCACCGGTGCCCGCGAAGTCAACCTGATGGGCGCCTGCGCCGGGGGCCTG ACCATTGCCGCCCTGCAAGGCCATTTGCAGGCCAAGCGCCAGTTGCGGCGCATCTCCAGCGCCAGCTACCTGGTGAGCCTGCTGGACAGCCAGATTGACA GCCCCGCCACCCTGTTCGCCGACGAACAAACCCTCGAAGCCGCCAAGCGCCGTTCCTACCAGCAAGGCGTGCTCGAGGGCCGCGACATGGCCAAGGTGTT CGCCTGGATGCGTCCCAACGACCTGATCTGGAACTACTGGATCAATAATTACCTGCTGGGCAAGGAACCGCCGGCCTTCGACATCCTGTATTGGAACAAC GACAACACGCGCCTGCCCGCCGCACTGCATGGCGACCTGCTGGACTTCTTCAAGCACAACCCCCTGAGCCACCCCGGTGGCCTGGAGGTATGCGGCACGC CTATCGATTTGCAGAAGGTCACGGTGGACAGCTTCAGCGTGGCCGGGATCAACGACCACATCACGCCGTGGGACGCGGTGTACCGCTCCACCCAGTTGCT CGGCGGCGACCGGCGCTTCGTGCTGTCCAACAGCGGGCATATCCAGAGCATCCTCAACCCGCCGGGTAACCCCAAGGCCAACTATGTCGAGAACCCCAAG CTGAGCAGCGACCCACGGGCCTGGTACTACGACGCCAATCACGTCGAGGGCAGTTGGTGGCCGCAGTGGCTGGAGTGGATCCAGCAACGCTCAGGCGTAC AGCGCGAAACCCTCACCGCCCTGGGCAACCAGAATTACCCACCGATGGAAGCGGCGCCGGGCACTTACGTGCGCGTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTCAACGATCACATTAAGAAGACTGGATGAAGACCCGCGACCGTATCCTTGAATGCGCCCTGCAGCTGTTTAACCAGAAGGGCGAACCGAACGTGTCGA CCATGGAGGTGGCCAATGAAATGGGGATCAGCCCCGGCAACCTCTACTACCACTTCCATGGCAAGGAGCCACTGGTGCTCGGGCTGTTCGAGCGCTTCCA GAGTGAGCTGATGCCCCTGCTCGACCCACCGGCAGACGCCCAACTGGAAGCCGAGGACTATTGGCTGTTCCTGCACTTGATCATCGAGCATATGGCTCAC TACCGTTTTTTGTTCCAGGATCTGTCAAACCTGGCGGGGCGCCTGCCGAAACTGGCCAAGGGCATTCGCAACCTGCTCACCGCGCTCAAGCGCACCCTTG CATCGCTGCTTGCGCACTTGAAGGCTGCGGGGCAATTGGTCAGCGATACCCAGGCGCTGGGGCAATTAGTGGAACAGATCACCATGACCCTGCTGTTCTC
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| Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MRERPVTNPAPTPAAFINAQNAITGLRGRDLLSTLRSVAAHGWRNPLHTARHALALGGQLGRVLLGETVHEPNPRDSRFTDPTWTLNPFYRRSLQAYLSW QKEVRHWIDDSTLSSDDRARAHFAFSLLNDAVSPSNTLLNPLAVKELLNSGGNSVVRGVSNLLDDLLHNNGLPRQVTKQAFEVGKTVATTPGSVVFRNEL LELIQYKPMSEKQYAKPLLIVPPQINKYYIFDLSPTNSFVQYALKNSLQTFIVSWRNPDVRHREWGLSTYVAALEEALNVCRAITGAREVNLMGACAGGL TIAALQGHLQAKRQLRRISSASYLVSLLDSQIDSPATLFADEQTLEAAKRRSYQQGVLEGRDMAKVFAWMRPNDLIWNYWINNYLLGKEPPAFDILYWNN DNTRLPAALHGDLLDFFKHNPLSHPGGLEVCGTPIDLQKVTVDSFSVAGINDHITPWDAVYRSTQLLGGDRRFVLSNSGHIQSILNPPGNPKANYVENPK LSSDPRAWYYDANHVEGSWWPQWLEWIQQRSGVQRETLTALGNQNYPPMEAAPGTYVRVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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