Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGTCCAGCAACCGCAGGTGCAGGTTTTGTCCATCCACCGCGACGGTGAGCAACTCTTCACCTGTGTGCGCCTTGATGACCTGAGGTACCTGCATCTGCAC ATGGGCCTGCAGGTTGTTGAGGGCCGCGTGCTGGGCCTGCAACTCAACGGCAGCGTAGTCACCCCGGCAGATTTTCAGAACAAAGCGGCCACGGTCGCTG TCGACCTTGTAATTGAGGTCTTGCTGGCTGCCCAGCGCCTGCAGGGTGCCGGTGAGGCCGTAATGCTGCTCAAGCAGGTGTGCCGCCTGATCGGGGTCCA CTTGCGGGCAAGGTAGGCTGGCGCGATGGATCAACGTGGCAAGCAACATTGTGACGACCTCGGTTTTTTTAGGCGTCTATATCGCCATTGTTAAGGGGCT AACGCAACCCCCAGCACACGGCACGCTTGCGCCGACCTGCTCCACCACTCAAGCTATGCTCCATTTGCTTAATGTCCGTCTAAGGAAAAGGCCCCCCGAC
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DNA Sequence for Gene |
>U771_01705
ATGCGCATTCTCATCACCGGCGGCGCTGGTTTTATCGGCTCCGCCCTGATCCGCCACGTGATCCAGCACACCGAGCACGAAGTGCTTAACCTGGACAAAC TCACCTACGCCGGCAACCTGGAGTCGCTGACCAGCATCGCGTCCAACAGCCGCTATGAGTTCGTACAGGCCGATATCGTCGACCAGGCCACCGTCAGCGC CGTGCTCGCGCGCTTCGAGCCGCAGGCGATCATGCACCTGGCGGCCGAGTCCCATGTCGACCGCTCCATCGATGGCCCGTCGGATTTTATCCAGACCAAT ATCGTCGGCACCTACAGCCTGCTGGAGGCCGCCCGCGCCTATTGGCAAAAGCTCGACGAACCCGCCAAGCGCGCGTTCCGCTTCCATCACATCTCCACCG ACGAAGTGTATGGCGACCTGCATGGCGTGGACGACCTGTTCACCGAAACCACGCCCTACGCGCCCAGCTCGCCCTACTCGGCCAGCAAGGCTGCGTCCGA CCACCTGGTGCGCGCCTGGCAGCGAACCTATGGGCTGCCGGTGTTGCTGACCAATTGTTCGAACAACTATGGGCCGTTCCACTTCCCGGAAAAGCTGATC CCCCTGGTGATCCTCAATGCCCTGGCGGGCAAGCCGTTGCCGGTCTATGGCGATGGCTTGCAGGTGCGCGACTGGCTGTTCGTAGAAGACCACGCCCGCG CATTGCTCAAGGTGGTGACCGAGGGTGTGGTCGGCGAGACCTACAACATTGGCGGGCATAACGAGCAGAAAAACATCGACGTGGTGCGCGGCATCTGCGC CCTGCTCGAAGAGCTGGCGCCGCAACGCCCGGCCGGCGTCGAGCAATTCACCGACCTGATCACCTTCGTCAAGGATCGCCCCGGCCACGACCAGCGCTAT GCGATCGACGCCAGCAAGATCGAACGCGAGCTGGGCTGGGTCCCACAGGAAACCTTTGAAAGCGGGCTGCGCAAGACCGTGCAGTGGTACCTCGACAACC TGGAGTGGTGCCGCAGGGTCCAGGACGGCAGTTATCAGGGCGAACGATTGGGCAACACTGACTTCAAGGATCTGATTGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGAAGGGAATCGTATTGGCCGGGGGCTCCGGCACCCGTTTGCACCCCATTACCCTGGGGGTGTCCAAGCAGCTGTTGCCGGTGTATGACAAACCGATGAT CTACTACCCGATCTCGGTGCTGATGCTGGCGGGAATCAAGGACATCCTGGTGATTTCCACACCGGTCGACCTGCCGCAATACCGCAACCTGCTGGGGGAT GGCAGCCAGTTTGGCGTACGCTTCAGCTATGCGGAGCAACCCTCGCCAGATGGCCTGGCCCAAGCGTTCATCATCGGTGAAGAGTTCATCGGCGATGATC CGGTCTGCCTGATCCTGGGTGACAACATCTTCCACGGCCAGCATTTTGGCGACCAGCTGCGTACCGCGGCCGAGCGCCCCTCCGGGGCTACCGTATTCGG CTACTGGGTCAAGGACCCGGAGCGTTTCGGGGTGATCGACTTCGACAAAGACGGCCGCGCCCTGTCCATCGAAGAAAAACCGGCCAAGCCCAAGTCGTCG
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Amino Acid Sequence |
>dTDP-glucose 4,6-dehydratase
MRILITGGAGFIGSALIRHVIQHTEHEVLNLDKLTYAGNLESLTSIASNSRYEFVQADIVDQATVSAVLARFEPQAIMHLAAESHVDRSIDGPSDFIQTN IVGTYSLLEAARAYWQKLDEPAKRAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLPVLLTNCSNNYGPFHFPEKLI PLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALLKVVTEGVVGETYNIGGHNEQKNIDVVRGICALLEELAPQRPAGVEQFTDLITFVKDRPGHDQRY AIDASKIERELGWVPQETFESGLRKTVQWYLDNLEWCRRVQDGSYQGERLGNTDFKDLIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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