Pseudomonas aeruginosa SCV20265, SCV20265_4640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa SCV20265, complete genome. [Details]
DNA Sequence Upstream of Gene
AACACCGGCAGCAACGCAGCCGAACAGATTCTCGGTCACGCCCGTTACGCGCTGCTCCTGCAATCGCGCCTGGCAGGCCTGGCGCCGCCGCTGGACGGCG TCTACCCGGCGATCCAGAACCGTGTCGGACTGGTCGAGGCAGTGCGCTTCGCTCGCGACATGGGCTTCGGCGGGTTGCTGTGCATCCATCCGAGCCAGGT CGAGCCGATCCACCAGACATTGATGCCGAGTCTCGCGGAACTGGAGTGGGCGCGTCGGGTGGCAGAGGCCGGCGCCTCCGGTGCCGGCGTCTTCGTGGTC GACGGCGAGATGGTCGACGCGCCGGTGCTGGGACGCGCGCGACGCCTGCTGGAGCGGGCCGGGGAGGGTGGCTGAACGCGTTCGACAGACGCGAACGCGG GCTTGAGCAATGGCGAATTCTCCGAACGCGCCGGCTGCGTCAGGCTCGTCGATACCTCGAAAGCACAACAACAATCTGAGGTCACGAAATGTTCAAGACG
DNA Sequence for Gene
>SCV20265_4640
ATGGTACGGGCGCTGTTGTGCGCCCTGGCGATCGGTGGCTCCTGCCTGGCGAATGCCGCGCAGCCGATCGTCATCAAGTTTTCCCACGTGGTCGCGGAAA ACACGCCCAAGGGCCAGGGCGCGCTGCTGTTCAAGAAGCTCGTCGAACAGCGCCTGGGCGGCCGGGTCGAGGTGGACGTCTATCCCAACTCGTCGCTGTT CGGCGATGGCAAGGAAATGGAGGCGCTGCTGCTGGGCGACGTGCAGATGCTGGCGCCGTCCCTGGCCAAGTTCGAGCAGTACACGCGCAAGGTGCAGATC TTCGACCTGCCGTTCCTCTTCGACGACATCCAGGCGGTCGACCGCTTCCAGCGCAGCCCGCAGGGGCACGCCCTGCTGACCAGCATGCAGGGCAAGGGCA TCCTCGGCCTGGCCTACTGGCACAACGGGATGAAGCAGCTCTCCGCCAATCGCCCGTTGCTGGAGCCGGAAGACGCGCGCGGGCTGAAATTCCGCGTGCA GGCGTCCGACGTGCTCAACGAGCAGTTCCGCCAGCTCCGCGCGATCTCCCGGAAGATGTCCTTCGCCGAGGTCTACCAGGGCTTGCAGACCGGCGTGGTG AATGGCACCGAGAACACCTGGTCGAACTACGAGAGCCAGAAGGTCAACGAGGTGCAGAAGTATTTCACCGAGTCCAACCACGGCCTGGTGGACTACATGG TGATCACCAACGCGAAGTTCTGGAACGGCCTCCCGGCGGACATCCGCGAAGCGCTGCAGCGGATCATGGACGAGGTCACCGTGCAGGTGAACCTCGAGGC CGAGCGCCTCAACCGCGACGCCCGCCAGCGCATCCTCGCCAGTGGCGTCAGCGAGATCCATACCCTGACCCCGCAGCAGCGCGCCGACTGGCGCCAGGCG ATGCAGCCGGTATGGCAGAAATTCCGCGGCAATGTCGGCGCTGACCTGCTCCAGGCCGCCGAAGCCTCCAACCGTCCCGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGTCCGGCCCCGCCCGGCCGGGCGGGGCATTGTGGAGAACGCTGCGATGAATCGACTCGTGCGCGTCTGGAACCGCTTCGAGGAGGGCGCTATCGCCT TCCTGCTGGCGGCGATGACGCTGGTGACCTTCCTCTATGTGGTGATGACCAACGTCTTCACCCTGTTCTACGACCTCGGCGACCGCCTGCCGACACTGCG GGCTCCGCTGTACTCGATGGGCGACGCGATCCTCGGGGTAGCCCAGGATATGTCCTGGAGCAACGCGCTGACCAAGGCGCTGTTCGGCTGGCTGATCTTC CTCGGCATCGCCTACGGCGTACGCACCGCCGGCCACCTCGGGGTGGATGCCCTGGTGCGCCTGGCGCCGCGTCCCTTGCAGCGCCTGATCGGGATACTCG CCTGCCTCTGCTGCCTGGGCTACGCCGGGCTGTTCATGGTCGCCAGCTACGACTGGGTGAAGACCCTGTTCGTCGCCGGCATCGGCGCCGAGGACCTCGA
Amino Acid Sequence
>TRAP-type C4-dicarboxylate transport system, periplasmic component
MVRALLCALAIGGSCLANAAQPIVIKFSHVVAENTPKGQGALLFKKLVEQRLGGRVEVDVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTRKVQI FDLPFLFDDIQAVDRFQRSPQGHALLTSMQGKGILGLAYWHNGMKQLSANRPLLEPEDARGLKFRVQASDVLNEQFRQLRAISRKMSFAEVYQGLQTGVV NGTENTWSNYESQKVNEVQKYFTESNHGLVDYMVITNAKFWNGLPADIREALQRIMDEVTVQVNLEAERLNRDARQRILASGVSEIHTLTPQQRADWRQA MQPVWQKFRGNVGADLLQAAEASNRPD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site