Pseudomonas aeruginosa SCV20265, SCV20265_4600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003887 DNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11799
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003684 damaged DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11799
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 54 96 1.4E-9
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 97 158 5.7E-21
FunFam G3DSA:3.40.1170.60:FF:000001 DNA polymerase IV - - 4 56 2.9E-26
FunFam G3DSA:1.10.150.20:FF:000019 DNA polymerase IV - - 150 211 6.0E-25
Pfam PF00817 impB/mucB/samB family IPR001126 UmuC domain 2 137 1.1E-45
Pfam PF11799 impB/mucB/samB family C-terminal domain IPR017961 DNA polymerase, Y-family, little finger domain 223 322 2.4E-6
Gene3D G3DSA:1.10.150.20 - - - 159 212 2.4E-19
Gene3D G3DSA:3.40.1170.60 - - - 4 53 1.4E-22
Pfam PF11798 IMS family HHH motif IPR024728 DNA polymerase type-Y, HhH motif 152 180 5.3E-6
CDD cd03586 PolY_Pol_IV_kappa IPR022880 DNA polymerase IV 1 320 0.0
SUPERFAMILY SSF100879 Lesion bypass DNA polymerase (Y-family), little finger domain IPR036775 DNA polymerase, Y-family, little finger domain superfamily 225 331 1.82E-23
Hamap MF_01113 DNA polymerase IV [dinB]. IPR022880 DNA polymerase IV 1 331 32.543755
PANTHER PTHR11076 DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER - - 1 323 1.1E-85
SUPERFAMILY SSF56672 DNA/RNA polymerases IPR043502 DNA/RNA polymerase superfamily 1 217 1.78E-81
FunFam G3DSA:3.30.70.270:FF:000002 DNA polymerase IV - - 52 148 2.8E-40
Gene3D G3DSA:3.30.1490.100 - IPR036775 DNA polymerase, Y-family, little finger domain superfamily 224 332 6.8E-24
FunFam G3DSA:3.30.1490.100:FF:000011 DNA polymerase IV - - 224 332 2.1E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.