Pseudomonas aeruginosa SCV20265, SCV20265_2084
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa SCV20265, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCAATGCCGGGCAAACCAACTATGCCGCGGCGAAGGCCGGCCTGGAGGGCTTCACCCGTGCGCTGGCCCGGGAAGTCGGTTCGCGTGCCATTACCGTGAA TGCGGTGGCGCCGGGCTTCATCGACACCGACATGACCCGCGAGCTGCCGGAAGCCCAGCGCGAAGCGCTGCTGGGCCAGATTCCGCTGGGTCGCCTGGGG CAGGCGGAAGAGATCGCCAAGGTGGTCGGCTTCCTCGCTTCGGACGGCGCAGCCTATGTGACCGGGGCCACCGTGCCGGTCAATGGTGGGATGTACATGA GCTGAATGTGACGTTACCTTTCTCGGGTCTGTCATAAGCGCTGTCTAGAATTCGTTGCGGAATTGCAGCCGGGTTATTAGATAGAATTATCGAAGTGGCC GTGGGAAGGTGAGGCGTTCAGCTTGAAAAGCAGAAAACCCTTTCTATACACTTACCCGCAGCCCAGCTGCTCGGATTTTCCATAGGAGTGAAAACAAGGT
|
|
| DNA Sequence for Gene |
>SCV20265_2084
ATGAGCACCATCGAAGAACGCGTTAAGAAGATCGTCGCTGAACAACTCGGCGTGAAGGAAGAAGAAGTCACCAACAGCGCTTCCTTCGTCGAAGACCTGG GCGCCGACTCCCTTGACACCGTCGAGCTGGTGATGGCTCTGGAAGAGGAATTCGAGACCGAAATCCCTGACGAGAAAGCTGAAAAGATCACCACCGTTCA GGAAGCCATCGACTACATCGTTGCTCACCAGCAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTAGTCGTCGGATTTTCCGACGTGGAAAAGCCGCACAGCCTGTAAGGGCGTGCGGCTTTTCTTTAGCGCCTTACCTACTCTGGTAGTCTGTCGGCGCAAC CCCGTGAAATGAGAAAGAGGAAGTCGTAGTGTCGCGTAGACGCGTCGTCATTACTGGCATGGGCATGCTGTCGCCGCTGGGCCTGGATGTCCCGAGCAGT TGGGAAGGTATTCTCGCCGGTCGCAGCGGGATCGCCCCGATCGAGCATATGGACCTGTCCGCCTATTCCACCCGCTTCGGTGGTTCGGTCAAGGGTTTCA ATGTCGAGGAATACCTGTCCGCCAAGGAAGCCCGCAAGCTCGACCTGTTCATCCAGTACGGTCTCGCCGCCAGCTTCCAGGCCGTTCGCGATTCCGGCCT GGAGGTCACCGACGCCAATCGTGAGCGTATCGGCGTATCCATGGGTTCCGGTATCGGCGGCCTGACCAATATCGAGAACAACTGCCGATCCCTGTTCGAG
|
|
| Amino Acid Sequence |
>Acyl carrier protein
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEKAEKITTVQEAIDYIVAHQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|