Pseudomonas aeruginosa MTB-1, U769_28450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | paem01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | paem00521 | Streptomycin biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | paem00523 | Polyketide sugar unit biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | paem01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF04321 | RmlD substrate binding domain | IPR029903 | RmlD-like substrate binding domain | 3 | 296 | 8.2E-112 |
| CDD | cd05254 | dTDP_HR_like_SDR_e | - | - | 3 | 286 | 5.45122E-97 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 1 | 296 | 5.01E-96 |
| PANTHER | PTHR10491 | DTDP-4-DEHYDRORHAMNOSE REDUCTASE | IPR005913 | dTDP-4-dehydrorhamnose reductase family | 2 | 297 | 9.5E-67 |
| NCBIfam | TIGR01214 | JCVI: dTDP-4-dehydrorhamnose reductase | IPR005913 | dTDP-4-dehydrorhamnose reductase family | 3 | 295 | 4.3E-115 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 4 | 283 | 2.0E-106 |
| Gene3D | G3DSA:3.90.25.10 | - | - | - | 159 | 286 | 2.0E-106 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.