Pseudomonas aeruginosa MTB-1, U769_20400 (flgC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MTB-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATTGAATATAAAGGGTTTTAATAATCTGGCACGGGCCTTGCTGAAGTGTTGGCGACGAAAGCCACACCGGCAAACAGGTTCGCAGCCATGAGCATCAGTT TCGACAGAGCACTCGGTATCCACCAGCAGGCCCTCAGCTTCCGCGCCCAGCGCGCCGAAGTGCTGGCCAACAACCTGGCCAACGCCGATACCCCGAACTA CAAGGCTCGCGACCTGGACTTCGCCGCGGTTCTCGCCGAGCAGAAGGACAAGGCCGCCAAGGGTACCTTCGCCACCCGCACCACCAACGAGCGGCATATC GCCGCCGAAGGTTTCGGCATGGGCGAGGGCAGCCTGCAGTACCGCATCCCGGTCCAGCCGTCGATCGACCAGAACACTGTCGACGCCCAGATCGAGCAGG CCAACTACGCCGAGAACGCCATGCACTTCCAGGCGTCCTTCACCTTCCTCAACAGCAAATTCAAAGGGCTGGTCAGCGCCCTGCGTGGAGAGTAACCGCC
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| DNA Sequence for Gene |
>U769_20400
|flgC
ATGTCCCTCGCCAGTGTCTTCAACATTGCCGGTAGCGGCATGAGCGCCCAGAGCACCCGTCTGAACACCGTGGCCAGCAACATCGCCAACGCCGAGACGG TTTCCTCCAGCGTCGACAAGACCTACCGCGCCCGCCATCCGGTGTTCTCCACCATGTTCCAGCAGGCCCAGGGCGACAGTGGCTCGCTGTTCGCCGACCA GGACAGCTCCGGCGCCGGCGTGCAGGTGCTGGGCATCGTCGAGGACCAGAGTTCGCTGATGCCGCGCTACGAGCCGAACCATCCGGCCGCGGATGCCAAC GGCTACGTGTATTACCCCAATGTGAACGTGGTCGAGGAAATGGCCGACATGATTTCCGCCAGCCGTGCCTTCCAGACCAACGCGGAAATGATGAATACCG CCAAACAGATGATGCAGAAGGTCCTGACCCTGGGTCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGAGTAGAGCATGAGCATCGATAACGTCAGCGGCACCAGCAGCAACACCGGCAACGTCAACGGCAGCAATCGCGCCGCCGGCAGCGGCGCCACCGAGA CCGGGCAGAGCGTCAAGGGCAGCAGCAACCTGGGCAAGGACGAATTCCTCAAGCTGCTGGTGGCCCAGTTGAAGAACCAGGACCCGATGTCGCCGCAGCA GAACGGCGAGTTCATCGCCCAACTGGCCCAGTTCAGCACCGTGGAAGGCGTGCAGTCGCTGAACAAGAGCATGGAGAGCATTCTCTCCAACTACCAGTCG TCGCAGGCCCTGCAAGCCTCGTCGCTGGTGGGGCGCAAGGTCATCGTGGCGACCGACAAGTCGGTGGTGGACACCAAGGACACCTTCAAGGCGTCCCTCA ACCTGCCGGTTTCCAGCAGCAACGTCTGGGTCAACGTCTACGACGACAAGGGCACCGTGGTCAACCGCATCAACCTCGGCCAGCAGGCTGCCGGCAGCGT
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| Amino Acid Sequence |
>flagellar basal body rod protein FlgC
MSLASVFNIAGSGMSAQSTRLNTVASNIANAETVSSSVDKTYRARHPVFSTMFQQAQGDSGSLFADQDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADAN GYVYYPNVNVVEEMADMISASRAFQTNAEMMNTAKQMMQKVLTLGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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