Strain | Pseudomonas aeruginosa MTB-1, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGCTCGCCCGCGAACAGCAGGTCGACCCGCTCAGCCTGACCGGCTCCTACGCCGGCGCCATGGGCCTGCCGCAATTCATGCCGAGCAGCTTCCGCGCCT ACGCGGTGGACTTCGACGGCGATGGCCACATCAATATCTGGAGCGACCCGACCGACGCCATCGGTAGCGTCGCCAGCTACTTCAAGCAGCACGGCTGGGT CACCGGCGAGCCGGTGGTCTCGGTGGCCGAGATCAACGACGAGAGCGCCGAGAGCGCGGTGACCAGGGGCGTCGACCCGACCATGAGCCTGGGCGAGCTG CGTGCCCGCGGCTGGCGCACCCATGATGCGCTGCGCGACGACCAGAAGGTCACGGCGATGCGTTTCGTCGGCGACAAGGGCATCGAGTATTGGGTCGGTT TGCCGAACTTCTACGTGATCACCCGCTATAATCGCAGCGCCATGTATGCCATGGCGGTTTATCAGCTGGCGGGCGAGATTGCCCGCGCGCGAGGTGCCCA
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DNA Sequence for Gene |
>U769_04840
TTGAGCAAGCGTGTCCGCTCCTCCCTGATCCTGCCCGCCGTCTGCGGCCTCGGGCTGGCGGCCGTGCTGTTGAGCAGTTGCTCCAGCAAGGCGCCCCAGC AGCCGGCCAGGCAGGCGGGTATTTCCGGGCCGGGCGACTATTCCCGTCCGCATCGCGACGGCGCCCCCTGGTGGGACGTCGACGTGTCGCGGATCCCCGA TGCGGTGCCGATGCCGCACAACGGTTCGGTGAAGGCCAATCCCTACACCGTGCTGGGCAAGACCTACTACCCGATGAACGATGCGCGGGCCTACCGGATG GTCGGCACCGCGTCCTGGTACGGCACCAAGTTCCACGGCCAGGCCACCGCCAACGGCGAGACCTACGACCTCTACGGCATGACTGCCGCGCACAAGACCC TGCCGTTGCCGAGCTACGTGCGGGTGACCAACCTGGACAACGGCAAGAGCGTGATCGTCCGCGTCAACGACCGCGGCCCGTTCTATTCCGACCGGGTCAT CGACCTGTCCTTCGCCGCGGCGAAGAAGCTCGGCTATGCCGAGACCGGCACCGCGCGGGTCAAGGTCGAAGGCATCGACCCGGTGCAGTGGTGGGCCCAG CGCGGCCGGCCGGCACCGATGGTCCTGGCGCAGCCCAAGCAGGCGGTGGCCCAGGCCCCCGCTGCGACGCAAACTCAGGCGGTGGCGATGGCCCAGCCGA TCGAGACCTACACCCCGCCGCCGGCGCAGCACGCGGCCGCCGTGCTGCCGGTGCAGATCGACTCAAAAAAAAACGCTTCATTACCAGCCGATGGCCTGTA TCTCCAGGTGGGCGCCTTCGCCAACCCGGATGCGGCGGAGCTGCTGAAGGCCAAGCTGAGCGGCGTGACGGCTGCGCCGGTGTTTATCAGCTCGGTCGTG CGCAACCAGCAGATTCTGCACCGGGTGCGGCTGGGACCGATCGGTTCGGCGGACGAGGTTAGCCGCACCCAGGACAGCATCCGCGTGGCCAACCTTGGCC AGCCGACGCTGGTACGCCCCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCCTACTCACGCAGGGAATTCCCGCAAGGGATTGTTTGACCATTGGTAGAACCAGAGAGACGGATGAACATCACCACTATCGCGAAACGCTTGTCACT GCTTGTCCTGTTCATCGCCCCTACGGCTGGCTGGGCTGCTGAATCCATGGTTCCGGCGCCGCCGCAGCTGGCCGCCAAGTCGTACGTCCTGATGGACGGC GAGAGCGGCCAGGTTCTGGTCGAGAACAACGGCGACCAGCGCCTGCCGCCGGCCAGCCTGACCAAACTGATGACCGCCTACATCGCCACCAAGGAGATCG AGGCCGGCCGCATCGGCGAGAACGACCTGGTCACCGTCAGCGAACATGCCTGGCGCACCGGCGGTTCGCGGATGTTCATCAAGGTCGGCAGCCAGGTATC GGTGAGCGACCTGCTGCATGGCATCATCATCCAGTCCGGCAACGACGCCAGCGTCGCCCTGGCCGAGCATATCGCCGGCAGCGAAGACGCTTTCGCCGAC
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Amino Acid Sequence |
>RlpA-like lipoprotein
MSKRVRSSLILPAVCGLGLAAVLLSSCSSKAPQQPARQAGISGPGDYSRPHRDGAPWWDVDVSRIPDAVPMPHNGSVKANPYTVLGKTYYPMNDARAYRM VGTASWYGTKFHGQATANGETYDLYGMTAAHKTLPLPSYVRVTNLDNGKSVIVRVNDRGPFYSDRVIDLSFAAAKKLGYAETGTARVKVEGIDPVQWWAQ RGRPAPMVLAQPKQAVAQAPAATQTQAVAMAQPIETYTPPPAQHAAAVLPVQIDSKKNASLPADGLYLQVGAFANPDAAELLKAKLSGVTAAPVFISSVV RNQQILHRVRLGPIGSADEVSRTQDSIRVANLGQPTLVRPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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