Pseudomonas putida H8234, L483_31475
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGACCCGCTCCTTCATCTCGCGTGCGGCCTTGTTGGTGAAGGTCATCGCCACGATGTACTGGGCACGGATGCCGCAGTTCTGGATGAGGTGGGCAATCT TGCGCGTGATCACGCTGGTCTTGCCCGAACCTGCACCGGCGAGCACCAAAAGAGGGCCGCCGACGTAGTCACGGGCTTCCTGCTGCCGGGGATTGAGTCG GGACATGCTAGAAACCGGGGGTCGCCAGAAAATAGCCGCGCATTCTAACAGGCATGGGGCGGTTGTGGCGCGACCGTCTGACGTCTGAGTCAGACTTTTG TCTGTCCCATTATTAGTGCGGCTAATGCTACTAGAGGAAAAAATCATATTTGCCGCTTCCCCTCGTTTCGAGCAGGATGCACGACAAAATACGTCGGAAT GCTACGGTCGCAAATGCATGTATAAAAGTGAAAATCATTTTCATTAATGCAGTAGCATAATGGCTGATACCGTTGCACCGTGAAGTCCTAAGGAGCCCGC
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| DNA Sequence for Gene |
>L483_31475
TTGTCCACGCCTGTCGAACCTTTGCGTTTGCTGCTGTTGGCTGATGAGCCGCAATGGGCCGCCTTGTTGCACGCATGCATGCCTGCCCTGAACGGCAGTG CAGTGCTGCTGACCGCGCCTGACTGGGACGCGGTGGATAGCCTGTTCAGCCATGATCGCCAGGCCGTGGTGCTGGCAACCCCAGCCCTGCAGCCGGCACC TGGGCGCTGCGAGCTACCGACCATCCTGCTGCTCGATCACGAGCCTGAGGTGGCGCCCGGCGCGGTCAGCGACTGGCTGGTACGCGACCAGCTCAATGCC GACGCCCTGCGCCGCTCGCTGCGCCATGTGCGCGAACGTGGAGTGCTGGTGGCCACCTTGCAGCGCCTGGCCGAACAGGACCCATTGACCGGCATCGCCA ACCGCCAGGGCTTTCAGGCCTTGCTGACCGCGCGGCTGGCCGAAAACGATGGCCGTGGCATTGCCTTGGGCCACCTGGACCTGGACAACTTCCGCCACGT CAACGATGCGCTCGGCCACCAGAGCGGTGACCGCCTGATTCTGCAAGTGGTGGCGCGGATGCAAAACCAGCTGGAGGCTGGCGACCAGCTGGCGCGCCTG GGCAGCGACGAGTTTGCCTTGCTGATCGACACCCGACGCGACGCCAACCGCGCCGAATGGATCGCCGAACGCATCATAGAGGCCTTGGCCGAACCCTACT GGATCGACGGCGAAAGCCTGCTGCTGGGGTGCAGCCTGGGCTTGGCCCATGCCCGCGCGCAGAGCGGCGCCGACCCGCTGATGTGGCATGCGCACATTGC CATGCGCCAGGCCAAGGGCAGCCAGGGCTGTACCTTCCATGTGTTCAACGAGCGCATCAATCGAAACGCCCGCAGCCTTGCCGACCTGGAAAGCGAACTG CGCCGCGCGCTGCGCCGTGACGAGCTGGAGCTGCACTATCAGCCGCGGCTCGACCTGGCCGATGGGCGCATCGTCGGCCTGGAGGCGCTGGTGCGCTGGC GCCATGCCGAACGCGGGCTGTTACCGCCCAGCGAGTTCGTGCCCCTGGCCGAGCAGAGCGGCCTGATCGTGCCGTTGGGCTACTGGGTCATCTCCCGCGC CTTGCGCGACATGCAGGCGCTGTGCGAGCGCGGTCTGGAGCCGTTGCACATGGCGGTAAACCTGAGTTTCCGTCAGTTCCAGGACAGCCAGCTGCTGGCC ACCCTGAGTCGGCTGATCCTTGAGCATGGGGTGGACGCGCGCTGGCTGGAGTTCGAACTGACCGAAACGGCGGTGATGCGCCGCAACGAGCTGGTGCGCC AGACCATGGACGCCCTCGGCCGCCTGGGCGTGCGCTTCTCCCTAGACGATTTCGGCACCGGGTTTTCTTCGTTCGTGCACCTCAACAGCCTGCCGATCAC CTTGCTCAAGGTGGACCGCAGCTTTGTTGCAGAAATGGAAATGCGCGAGGAGAACCGCAAGCTGGTGCACGCCATGATCAACCTGGCGCACAACCTCAAC CTCGAGGTGGTGGCCGAAGGGGTGGAGAGTGAAGAGCAGCTGGCCTTGTTGCGCGGGTTTGGCTGTGACCAGGTGCAGGGCTTTTTGGTCAGCAAGCCGC TGCCGGTCGGGGAGCTGATCGATTTTTTGCTGAAGGTGCCTGGCCGTCAGCTGAATGTTGTCCCTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCCTTTCGCGGGCACGCCCGCTTCCACAGGGACCACGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCCGAAGTCAGGCCGAGGCAGCAGCC TCTGCACGCGCTTGCGCCTTCCCCAATAACCGTTTCATTCGCCACTCAAAGCCAAATGTCAGCGCCACTGCCGCACATGCCAGGCCCAGCGCCAGCCCCC ACCAGATCCCCACGGCACCACCGCCCAGGGTAAAGGTGAACAACCAGGCGCTCGGCGCACCCACCAGCCAGTAGCACACCAGCCCGATCAGGAAGGTGGT CTTGGCATCTTTCAGCCCACGGATCGAACCCATGGCAATCGTCTGCATGCCGTCGAACAGTTCGAACCATGCCGCCACCATCAATAACTGCACAGCCACC CGGAAGATCGCGGCAAAGGCCGGATCATTGCGGTCGATAAACAGTCCTACCAGCGCTTCGGGCAGCAGCAGGAACAGTGCGGCGAAGGCAAACATGATCA
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| Amino Acid Sequence |
>diguanylate cyclase
MSTPVEPLRLLLLADEPQWAALLHACMPALNGSAVLLTAPDWDAVDSLFSHDRQAVVLATPALQPAPGRCELPTILLLDHEPEVAPGAVSDWLVRDQLNA DALRRSLRHVRERGVLVATLQRLAEQDPLTGIANRQGFQALLTARLAENDGRGIALGHLDLDNFRHVNDALGHQSGDRLILQVVARMQNQLEAGDQLARL GSDEFALLIDTRRDANRAEWIAERIIEALAEPYWIDGESLLLGCSLGLAHARAQSGADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARSLADLESEL RRALRRDELELHYQPRLDLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLA TLSRLILEHGVDARWLEFELTETAVMRRNELVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLN LEVVAEGVESEEQLALLRGFGCDQVQGFLVSKPLPVGELIDFLLKVPGRQLNVVP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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