Pseudomonas putida H8234, L483_30500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCAACCAGGGCGCGGGTGGCCAGTACCAGTTCCCAGCTTGGCATTACCGCGCTGGCCAGGGTGGAGAGGGCGGCGCAAACCAGGGCAAAGACCATCA CCGGCTTGCGCCCGATGCGGTCAGAGATGGGGCCGGTGATCAGCAGGCCGAACGCCAGCATGGCGGTGGAAACCGACAGCACCAGGCTGCTCTGCGCCGC GTTGATGGCAAATTCTTTCGACAATAGCGGCATCATCGGCTGCACGCAGTACAGCAGGGCAAAGGTGGCGAAGCCGCCGCTGAACAGTGCCAGCACGGTC TTCATGAAGGCGGGGGTGCCTTTTTCAATCCACATTTCGTTCAGGGAGGCAGGCTCTGGTTCGGCAGGAAGGGGAGCTACAGCAGTTTTCACGGGCGGGT ACCTCTGGCGCAATGAAAAAAGCATATAGCTGGCTAATGATTAGATCCAATATATTGTTCGACCTATTTAAGACGTTTTTCGACTCATTAGGAGCTGGTC
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| DNA Sequence for Gene |
>L483_30500
ATGGAACTGCGTCACCTGCGCTACTTCATTGCTGTGGCTGAAGAGCTGCACTTTGGCCGCGCCGCCCAGCAACTGGGCATTTCCCAGCCGCCCCTGAGCC AGCAGATCCAGGCCCTGGAGCAGGAACTGGGAGCGCGGCTGTTCGAGCGTACCAACCGTCGGGTCGAGCTGAGCGAGGCGGGGCGACTGTTCCTTGAGGA AGCGCGGCAGGTGCTGGCGCAAGTGGAGAAGGCCGCAGATGTGGCGCGGCGGGCGCAGTTGGGTGAATTGGGCGAAATGAAGATTGGCTTTACCTCGTCT GCGCCATTCACCTCGAAGATCCCCAAGGCCATCCATGCCTTTCGCCAGCGCTTCCCGGCTGTGCACCTGAACTTAAAAGAAATGAGCAGCCGTGATATCG CCGAAGCAGTGTTCGACGAGTCCATCGAAGTAGGGCTGATGCGGCCGATGCCTTTGCCGGAAGGCTTGCTGGCCACCGAATTGTTCCGCGAGCCGCTGGT GGCGGTGATCAACGCATCGCATCCGCTGGCTGAAGGCACGGAACAAGGGGTGCACATGGCGGCGCTGGCCCATGAGCCGTTTGTGTTCTTCCCGCGCAGT TATGGCAGCGGCCTGCATGCACAGTTGCTCAGCCTGGCGCGGCAGGCGGGCTTCAGCCCGCACTTTGCCCAGGAGGCTGGGGAGGCAATGACCATCATCG GCCTGGTCTCGGCGGGGTTGGGGGTATCGGTGTTGCCAGCGTCGTTCCAGCGTATGCGCATCGAAGGGGTGGTGTACCGCACGCTGCTGGATGAAGGGGC GATGTCGGCGGTGTGGCTAGTGCAGCGCGAGCGGGGCAATTCGGTAATGGCCAAGGCGTTTGCCGAGCTGTTGACCGGGCAGGTGGTCGGCCAGGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTTGGCCAAATGGCGCTGGCCATTGCCGCAGTGCCGCCACATACTCGGGCATTCGTTGAAACACGGAGGTCAATCATGCGTCGCGTGGTGTTCAATCAG AAAGGTGGGGTGGGCAAGTCGAGCATCGCCTGCAACCTGGCGGCGGTCAGTGCCAATGAAGGCTACCGGACCCTTTTGATCGACCTGGATGCCCAGGCGA ACTCGACCCAGTACCTCACCGGCCTGACCGGCGAGGATATCCCGATGGGTATTGCCGACTTCTTCAAGCAAAGCCTGTCCAGCGGGCCGTTCAGCAAGAA GAACAAAGTCGATATCTACGAAACGCCGTTCGACAACCTGCACGTGGTCACTGCCACTGCCGAGTTGGCCGACCTGCAGCCCAAGCTTGAGGCCAAGCAC AAGATCAACAAGCTGCGAAAGTTGCTCGACGAGCTGGATGAGGACTACGAGCGTATCTACATCGATACCCCGCCAGCGCTGAACTTCTATGCCGTTTCTG
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| Amino Acid Sequence |
>LysR family transcripitonal regulator
MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFERTNRRVELSEAGRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSS APFTSKIPKAIHAFRQRFPAVHLNLKEMSSRDIAEAVFDESIEVGLMRPMPLPEGLLATELFREPLVAVINASHPLAEGTEQGVHMAALAHEPFVFFPRS YGSGLHAQLLSLARQAGFSPHFAQEAGEAMTIIGLVSAGLGVSVLPASFQRMRIEGVVYRTLLDEGAMSAVWLVQRERGNSVMAKAFAELLTGQVVGQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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