Strain | Pseudomonas putida H8234, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCCTGGCAGTCATTGCAACCGGCTTTGCCTTGTATGCGGCGTATGACCTGATCGCCGAGCGCGGTTCATCCTACCGGCCAGAAATTTTCCATGCCGTGGT CAATATGATTGCCGCGCACCCCTGGACAGGCCTGGGCCTGGGGGCTGACTACGATGTCAGTGCGGTGGGCAGGCACTTCGACCACACCCACAACATGTTC ACCCACGTTGCCGTGGAGATGGGCCTGCCTGGCATGCTGCTCTGGGTCATGGTGTGGTTGTTCACCCTGGGTGAAATCATCCGCGCGCGCGGTACCCTGT TCGGCAAGCTCCTGCTGGGCTTATGGGTGTACTCGACACTGGCCATGCAGTTCGATGCCGCCAGCCTTACCGGTACGCCACGTGCAGAATGGTTCATCAG CTGGCTGCCTGTTGGCCTTGCCATGATGCTGCCATGGGGGCGTGCCGAAAATGACGCCTGTGGTAAAATTTCCGGTTCAACCTGAACAGCGAGCTCGATA
|
|
DNA Sequence for Gene |
>L483_29810
ATGGCCGAAACACCGCGACCGGCGGAGCACACCTCCAGCCTGAAGATCTATTTCCGGCTGTTGGGCTATGTGAAACCCTATGTCGGCATTTTCCTGCTGA GCATTGTCGGTTTCGTGATCTTTGCCTCGACCCAGCCGATGCTGGCCGGCATTCTCAAGTACTTTGTCGATGGGCTGAGCAACCCTGAAGCGGTGTTGTT CCCCAACGTCCCCTACCTGCGCGACCTGCAATTGCTGCAGGCGGTGCCGTTGCTGATCATCCTGATCGCTGCGTGGCAGGGCCTGGGGTCTTTCCTTGGC AACTATTTCCTGGCCAAGGTTTCCCTGTGCCTGGTGCACGACCTGCGCGTGGAGTTGTTCAACAAGCTGCTGGTACTGCCCAACCGCTACTTCGACAACC ACAACTCCGGGCACCTGATTTCGCGTATCACCTTCAACGTGACCATGGTCACCGGTGCTGCCACCGATGCAATCAAGGTGGTCATCCGTGAAGGCCTGAC CGTGGTGTTCCTGTTCGCCTACCTGTTGTGGATGAACTGGCACCTCACCTTGGTCATGGTCGCCATCCTGCCGGTGATCGCGGTAATGGTCAGCATCGCC AGCAAGAAATTCCGCAAGCAGAGCAAGAAGATCCAGGTGGCGATGGGTGACGTCACCCACGTCGCGTCGGAAACCATCCAGGGTTATCGCGTTGTCCGTA GCTTCGGCGGCGAGGCTTACGAAGAGCAGCGGTTCAGCAAGGCCAGCCAGAGCAACACCGACAAGCAGCTGCGCATGACCAAGACCGGCTCCCTGTACAC GCCAATGCTGCAGCTGGTGATCTACAGCGCCATGGCGGCGCTGATGTTCCTGGTGCTGTTCCTGCGTGGTGAGTCCACCGCCGGTGACCTGGTGGCCTAT ATCACTGCTGCCGGCCTGCTGCCCAAGCCGATTCGTCAGTTGTCGGAAGTCAGCTCGACCATCCAGAAGGGCCTGGCAGGTGCAGAAAGCATCTTCGAGC AACTGGACGAAGAGCCTGAACTGGACACCGGTACGGTCGAGAAGGACCGTGTGGAAGGCCGCCTGGAAGTGCGCAACCTGAGCTTCACCTACCCAGGTAC CGAGCGTGAAGTGCTGAGCGACATCAGCTTTGTCGCCGAGCCAGGGCAGATGATCGCCCTGGTTGGCCGCTCTGGCAGCGGCAAATCGACCCTTGCGGCG CTGATCCCGCGCTTCTATCACCATGACCAGGGGCAGATCCTGCTCGATGGTGTGGAGATCGAGAACTACCGCCTGCGCAACCTGCGCCGCCACGTTTCGC AGGTGACCCAGCACGTTACCCTGTTCAACGACACCGTGGCCAACAACATCGCCTATGGCGATCTGGCAGGTGCCCCACGCGCAGACATCGAAGCCGCTGC GGCCGATGCCTACGCCAAGGAGTTCGTCGACCGCTTGCCGAAGGGCTTCGATACCGACGTGGGTGAAAACGGCGTGCTGCTCTCCGGCGGCCAGCGCCAG CGCCTGGCCATTGCCAGGGCACTGCTGAAGAACGCGCCGCTGCTGATTCTGGATGAGGCCACCTCGGCCCTGGATACCGAATCCGAGCGGCACATCCAGG CTGCCCTGGACCATGTGATGCAAGGCCGTACCACGCTGGTGATCGCCCACCGTCTGTCGACCATCGAGAAGGCCGACCAGATCCTGGTCATGGACCAGGG CCGTCTGGTAGAGCGCGGCACCCATGCTGAACTGCTCGCGGCTAATGGCCATTATGCCCGCCTGCACGCCATGGGCCTGGATGAGCCGGTCAAGGCCGAT ATCACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GTCCTCCCTCATCGGGGCCGTAACGGCCCCGATTGTCACGGGAATTTTCCGGGGGCGATCTGGCCATAAAGCCGTCGACTACCCTGTGCTAATATCCTGC CCCTGTTCATTATTTCCATATGGGTTGCCCATGAAGTTGTCCATGCCGCGTTTCGATCAAGCCCCGGTTCTGGTGGTCGGCGATGTCATGCTCGACCGCT ACTGGCATGGCGGTACTTCGCGTATCTCGCCTGAAGCGCCAGTGCCGGTGGTCAAGGTCGATCAGATCGAGGATCGACCCGGCGGCGCGGCCAACGTTGC CTTGAACATCGCTGCGCTGGGCGCACCGGCGTCGCTGATCGGCGTTACCGGCCAGGACGAGGCCGCCGACAGCCTGGCCAACAGCCTGCAGGCTGCGGGG GTGCGGTCTGTGTTCCAGCGCATCGCGCACCAGCCGACCATCGTCAAGCTGCGGGTCATGAGCCGTCACCAGCAACTGCTGCGTATCGATTTCGAAGAGC
|
|
Amino Acid Sequence |
>ATP-binding protein
MAETPRPAEHTSSLKIYFRLLGYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGSFLG NYFLAKVSLCLVHDLRVELFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIA SKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEEQRFSKASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGESTAGDLVAY ITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEEPELDTGTVEKDRVEGRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAA LIPRFYHHDQGQILLDGVEIENYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTDVGENGVLLSGGQRQ RLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHAELLAANGHYARLHAMGLDEPVKAD IT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|