Pseudomonas putida H8234, L483_27245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCAACAACCTGCGGCAGAACTCCCGTGCATTGGGCCTGGGCCTGCGCCGCCTGGGGCTGTTCACTAGCATCGTGCTTTTCGACCAGCGCGTGTCGATG TGGACCAGCCTGCTAGGGCTGACGGTGGCGGTGATCGCCAGCCTCAAGTTCGGCCTGGCCTTCCTGCTGGTGTACCTGCTGTGGATCGGCATCACCCGCC TGATCCTCACCATCATGCTGCTGTGCTCCGGCCACAACGTAGGCCCGGCCTACCCGCTGATTCTCTATTACAACCAGATCATCGGCGCGCTGATGAAGAT CTACGTGTTCTTCCGCCTCGACAAGCAGTCGTGGACGCGTCAGCCCACTGCCCTCAAGCGTGACCTCGCCAGCTTTCAACAATGGTTCAACACCTGGTCC TCGCGGACCATGACCTTCTCGGCTGCCAGCATCTTCGTTGCTGTGCTGTTCATGGTCGTGTGAGCCCAACCCGGATCGGATCTAACAGGAACAAACCCCC
|
|
| DNA Sequence for Gene |
>L483_27245
ATGAATACCGCCGTGAACGTCAATGTCGTGCATGAGTCCGAAGCCCAGCGCCAACACGCCCGGGTGCGCATTCCCGCCAAGCTGCGTTTCCTGGACGCCC AGCGCCGAACCCATGAAGTGAAGGTCGACGACCTTTCCGCCGGTGGCCTGAGCTTCCACACCAAGCAGCAACTGTCGGTGGGCGAAGTACTGCGCGGGCG CCTGCAGTTCGTGGTCGACAACCTGGGCCTGTCGATCGACATCGAGTTCCAGGTGCGCTCGTACAACCCGGACAATGGCCGGACCGGTGCGCAGTTCCAG AACCTTGAACCACGCGACATCGCCACCTTGCGGCACATCATCACCAGCCACCTGTCGGGCGAGCTGATCAGCATCGGCGATGTGCTGAGCACCTTGCAGC GCGACAATTTCACCAAGGCACGCAAGCAGAAAGACGGTGGGTCGGGCCTGAGCGCCTTCGGCCGACTCAAGGCAGTCACCGTCACCCTCGGCGTATTCGT GGTCGGCGTCGCGGCTTTCGGCTTTGTCGCCAAGTCGCTGTACGGCATGTACTTCGTCAGCCACGCCGAAGCCGGTGTGGTCGCGGTACCGACCACCACC GTCACCATGCCGCGCGACGGCACCGTGAGCAGCCTGGTCGACAGCGGTGGGCAGATTGCCAAGGGCGCACCACTGGCCAGCTTCACCACCAGCATGCTGG ACATGCTCAAGGGCAGCCTGGACGACGCGCAACTGGAGCCGGCGAAGATCGAGGAACTGTTCGGCAAGCAGCTGTCTGGCACCCTCACCAGCCCCTGCGA TTGCGTGGTTGCCCGCCAACTGGTGGACGACGGGCAGTACGCAGCCAAGGGCCAGCCGATCTTCCAGCTGATTCCGCGCACCACCACGCCGATGGTCGAG GCCCGCTTCAGCTACCGCCAGTTCGACGAGGTCAAGCCAGGTACCCAGGTCAACTTCCAGGTCGCCGGCGAAGACGAAGTGCGCACTGGCCAGATCGTCA GCAGCACCAGCCTGAACAGCGAAGACTTGTCCTCCGACATCCGCGTGCAGATCAAGCCTGACAGTGGCATGCCTGCCGAACTCGCCGGCCGCCCGGCAGC GGTCAACAGCGACCGTGGCCCGTCGCTGAACTGGCTTGTAGACAAAGCCGTGGCCCGTGGCCTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAGGATCACCGCATGATGCCCTGCAAGAAGAGCGCAAGCCTGGGCCTGTGTGCCCTGGCAGCCGCCATCACCCTGGCCGGCTGTGCAGGCCTGCCTGACC AGCGCCTGGCCAACGAAGCCATGAAACGCGGCGACACGGCACTGGCCGAGCGCAACTACAAGGCCCTGGCCGACTTGGGCTACAGCGACGCGCAAGTGGG CCTGGCGGACATCAAGGTGGCCACCCGCGACCCGTCGCAAATCAAGGAAGCCGAGGCCACTTACCGCGCCGCGGCCGCTACCTCGCCCCGTGCCCAGGCG CGTCTGGGCCGCCTGCTGGTGGCCAAGCCTGACAGCACCCAGGCCGAGCGCGAGGAAGCCGAAACCCTGCTCAGGCAGGCGGCGAAACAGGGCGAAAGCA ATACCCTGATCCCGCTGGCAATGCTTTACCTCAGCTATCCGCAGAGCTTCCCAACGGTCAACGCGCAGCAGCAGATCGACCAGTGGCGCGCCGCCGGCAA
|
|
| Amino Acid Sequence |
>hemolysin D
MNTAVNVNVVHESEAQRQHARVRIPAKLRFLDAQRRTHEVKVDDLSAGGLSFHTKQQLSVGEVLRGRLQFVVDNLGLSIDIEFQVRSYNPDNGRTGAQFQ NLEPRDIATLRHIITSHLSGELISIGDVLSTLQRDNFTKARKQKDGGSGLSAFGRLKAVTVTLGVFVVGVAAFGFVAKSLYGMYFVSHAEAGVVAVPTTT VTMPRDGTVSSLVDSGGQIAKGAPLASFTTSMLDMLKGSLDDAQLEPAKIEELFGKQLSGTLTSPCDCVVARQLVDDGQYAAKGQPIFQLIPRTTTPMVE ARFSYRQFDEVKPGTQVNFQVAGEDEVRTGQIVSSTSLNSEDLSSDIRVQIKPDSGMPAELAGRPAAVNSDRGPSLNWLVDKAVARGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|