Pseudomonas putida H8234, L483_26765

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pput02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	250	408	5.6E-35
PANTHER	PTHR33121	CYCLIC DI-GMP PHOSPHODIESTERASE PDEF	-	-	194	678	0.0
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	427	677	1.83E-93
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	239	413	3.0E-43
SMART	SM00052	duf2_2	IPR001633	EAL domain	422	668	3.7E-118
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	255	412	1.65E-35
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	423	683	5.3E-104
CDD	cd01948	EAL	IPR001633	EAL domain	429	668	3.10491E-113
Pfam	PF00563	EAL domain	IPR001633	EAL domain	428	663	3.5E-77
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	423	678	3.4E-103
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	239	412	4.8E-43
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	251	410	2.64282E-35
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	246	410	1.6E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.