Pseudomonas putida H8234, L483_24295 (flgC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCCCGTATTTGCGGGCTTTGCATGGGTTGGCACAGCCCTTGCTATACCTTGCTCAACGATATTCCGGTCAACCTCCGAAGGTTTCCCCGACATGAGCA TCAGCTTCGACAAGGCGCTTGGTATTCACGAAAAGGCTCTGGGCTTCCGCGCCCAGCGCGCCGAAGTGCTGGCCAACAACATCGCCAACGCCGACACGCC CAACTACAAGGCGCGTGACATGGACTTCGCCTCTGTGCTGGCCGCCGAAAGCGACAAGCAGCAAAGCGGCCGTTTCGCCATGGATCGCACCAATAGCCGC CACATCGAAGCCGAAGGCCTCGCCATCGCAGCCGACGATACCCTCAAGTACCGCACGCCGCTGCAGCCGTCGATCGACCAGAACACCGTGGACGCGCAGA TCGAGCAATCGAACTACACCGAAAACGCCATTGGCTTCCAGGCCAGCTTCACCTTGCTCAACAGCAAATTCAAAGGGCTGGTATCGGCCCTGCGGGGAGA
|
|
| DNA Sequence for Gene |
>L483_24295
|flgC
ATGACCATGTCCCTTTCCAGTGTCTTCAATATTGCCGGTAGCGGCATGAGCGCGCAGAACACGCGCCTTAACACCGTCGCTTCCAACATTGCCAACGCCG AAACCGTTTCTTCGAGCATCGACCAGACGTACCGCGCCCGCCACCCCGTGTTCGCCACCACCTTCCAGGATGCGCAAGCCGGCAGCAGCCAGTCGCTGTT CGAAGACCAGGGCGAAGCAGGGCAGGGCGTGCAGGTAAAAGGCATCGTCGAGGATCAGAGCACCCTGGAAGCACGCTACGAGCCCAATCATCCGGCGGCG AACAAGGACGGCTACGTCTATTACCCGAACGTCAATGTGGTCGAGGAGATGGCAGACATGATCTCCGCCAGCCGTGCGTTTCAGACCAACGCCGAGCTGA TGAACACGGCCAAGAGCATGATGCAGAAAGTCCTGACCCTGGGGCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAGGAAGCCGACATGACCACCACCAATTCCACCTCTGACGTCAGCAGCGCGTACCTGACCTCGCTGCAGAAGCAGACGTCGAAGACCGACAGCAGCACCG GCGCTGCCGGCAGCGCGCTGGGCAAAGATGCTTTTCTGCAGTTGCTGGTTACCCAGATGAAGAACCAGAACCCGCTCGATCCACAGGAAAACGGCGAGTT CGTGGCGCAGCTGGCGCAGTTCAGCAGCCTCGAGAGCATGCAGTCGCTGAACGATTCTGTGACCTATATCGCGGCAGGGTTGCAGTCTTCCCAGGCGTTG CAGGCCTCGTCACTGGTCGGGCGCAATGTAATTGTCCAGACCGACAAGGCTGTGGTCGACACCAGCAAGGATATGAAAGGCACGGTCAACCTGACGTCGT CCAGCACCGCCACCTCGGTGGGCATCTACGACAAGGATGACAAGCTGGTACGCACCCTCGACCTGGGTACCCAGAAAGCCGGCAAGGTCGACTTTACCTG
|
|
| Amino Acid Sequence |
>flagellar basal body rod protein FlgC
MTMSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQDAQAGSSQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAA NKDGYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKSMMQKVLTLGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|