Pseudomonas putida H8234, L483_24135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01590
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pput02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 421 441 2.6E-6
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 5 114 2.4E-28
Gene3D G3DSA:3.40.50.2300 - - - 1 121 2.2E-34
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 3 172 1.25E-42
FunFam G3DSA:3.40.50.2300:FF:000018 DNA-binding transcriptional regulator NtrC - - 1 127 9.4E-41
PANTHER PTHR32071 TRANSCRIPTIONAL REGULATORY PROTEIN - - 1 438 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 131 369 3.97E-71
Gene3D G3DSA:1.10.10.60 - - - 382 439 1.3E-10
Pfam PF02954 Bacterial regulatory protein, Fis family IPR002197 DNA binding HTH domain, Fis-type 401 437 8.6E-13
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 3 114 4.4E-36
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 148 291 3.7E-14
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 132 294 9.2E-69
CDD cd00009 AAA - - 129 290 1.70145E-24
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 122 299 4.8E-65
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 404 421 2.6E-6
FunFam G3DSA:3.40.50.300:FF:000006 DNA-binding transcriptional regulator NtrC - - 123 298 2.5E-76
Gene3D G3DSA:1.10.8.60 - - - 300 373 3.1E-23
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 341 437 8.06E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.