Pseudomonas putida H8234, L483_24040 (flhA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCATCACCAACCCGACGCACTATGCGGTGGCCCTGCAGTACGACCCGGAGAAGGGCGGGGCAGCACCCTTGCTGCTGGCCAAGGGCACCGACTTCATGGC CCTGAAGATTCGTGAGATTGGTGTGGAGCACAAGATCCAGATCCTCGAATCGCCGGCGCTGGCGCGGGCGATCTACTACTCCACCGAGCCTGAGCAGGAA ATCCCTGCCGGCTTGTACCTGGCCGTGGCCCAGGTACTGGCCTATGTGTTCCAGATCCGCCAGTACCGCGCTGGCAGGGGCAAGCGGCCAGAGCCGTTGA AAGAAGACCTGCCGATCCCGCCGGACCTGCGCCGCGACAGTTGACCTTGTGTCAGGGCTTCTGGCCCTTTCGCGGGCATGCCCGCGATGAGGCCAGCACA GGAAACATAAATCTCCCACCGAGCAAAGTTGGAAGGCTTCTTGCAAAGCCACGCCCAGGCGCCCCCTGGGCGTCAAAGTTTTGCATCAAGAGGACTCGCG
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| DNA Sequence for Gene |
>L483_24040
|flhA
GTGGATCGCACTCAGTTAATCAGCAACGCCCGCAACAACCTGGCCGGCCTCGGCCGGGGCAATCTGGGTGTGCCGTTGCTGCTGCTGGTGATGTTGGCAA TGATGATGTTGCCGATACCGCCGTTCCTGCTCGACGTGTTCTTCACCTTCAACATCGCCCTGTCGATCGTGGTGCTGCTGGTCTGCGTGTACGCCCTGCG CCCACTGGACTTTGCCGCCTTCCCCACCATCCTGCTGGTGGCCACGCTGTTGCGCCTGGCCCTGAACGTGGCGTCCACCCGTGTGGTCATGCTGCACGGC CAGGAGGGCCATGGTGCTGCCGGTAAGGTAATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGCAACTACGTGGTCGGTGCCGTGGTGTTTGCCATCCTCA TGATCATCAACTTCGTGGTGGTGACCAAGGGTGCCGGGCGTATTTCGGAGGTGAGCGCGCGTTTCACCCTCGACGCCATGCCCGGCAAGCAGATGGCCAT TGACGCCGACCTCAACGCCGGCCTGATCGACCAGGCCCAGGCCAAGCACCGCCGTGCCGAGGTGGCGCAGGAGGCGGAGTTCTACGGCTCGATGGACGGT GCCAGCAAGTTCGTGCGCGGTGACGCCATTGCCGGCCTGCTTATCCTGTTCATCAACCTGATTGGCGGCATGCTGATCGGCATGCTGCAGCACGGCATGA GTTTCGGTGATGCCGGCAAGGTGTACGCCTTGCTGACCATCGGTGACGGTTTGGTGGCGCAATTGCCATCCCTGCTGCTGTCCACTGCCGCCGCAATCAT GGTTACCCGTGCCTCGGGCTCCGAAGACATGGGCAAGCTGATCAACCGGCAGATGTTCGATTCGCCCAAGGCGCTGGCGGTGTCCGGCGCGCTGATGATC GTCATGGGGCTGGTGCCTGGCATGCCCCACGTGGCCTTCCTCGGCCTTGGCCTGCTGGCCTGTGGCGGTGCCTACCTGGTGTGGAAGAAGCAGCACAAGG CCAAGCTGGACGCGCAGCAGGAGGCGCAGCGGCAGCAAGACCTGCTGCCCTCGCCGCAGCGCGCGCTTGATACCAAGGAACTGGGCTGGGACGACGTGAC GCCCATCGACATGATCGGCCTGGAAGTCGGCTACCGGCTGATCCCGCTGGTCGACCGCAACCAGGGCGGCCAGTTGCTGGCGCGGATCAAGGGTGTGCGC AAGAAGCTGTCCCAGGACCTGGGTTTCCTCATGCCCACCGTGCATATTCGCGACAACCTCGACCTGCAGCCCAGCGCCTATCGCCTGACCCTGATGGGGG TAATCCTGGCCGAAGCGGAGATTTACCCGGACCGGGAGCTGGCGATCAACCCTGGGCAAGTGTTCGGCACCCTCAACGGCATTGCCGCACGCGACCCGGC GTTTGGCCTGGAGGCGGTGTGGATCGATGTCGGCCAGCGTTCACAGGCGCAGTCGCTGGGCTACACCGTGGTCGACGCAAGCACCGTGGTGGCCACCCAC CTCAACCAGATCTTGCAGAAGCACTGTCACGAGCTGATCGGCCACGAAGAGGTTCAGCAACTGCTGCAGGTACTGTCCAAGGCATCGCCTAAACTTGCAG AAGAGCTGGTGCCCGGTGTCATTTCCTTGTCGGGCCTGCTCAAGGTGCTGCAAGCGCTGTTGTCGGAACAGGTGCCGGTGCGCGATATTCGCAGTATTGC CGAAGCCATCGCGAACAACGCCGGCAAGAGTCAAGATACCGCCGCGCTGGTGGCGGTGGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTC GGCGTTGAGTCGGAGCTGCCAGTGATTACCCTGGAGCCAAGGTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAGGGTCAGGAAGATGGTG TTCTTCTGGAGCCGAGCATGGCCGAGAAGCTGCAACGTTCGCTGATCGAAGCGGCCCAGCGTCAGGAGATGCAGGGCCAGCCGGCCATCCTGCTGGTCGC CGGCCCGATCCGCGCCATGCTGTCGCGTTTCGGTCGCCTGGCTGTACCGAATTTGCATGTGCTGGCGTATCAGGAAATACCGGACAACAAGCAAGTCACC ATCGTTGCCACCGTGGGCCCTAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAGTGGATAATGCAAGTTAAGCGATTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTCCGTGACGAGCTGGGCGCCGATGCCGCGATCATTGG CAACCGCCGCATTGCCGGTGGTGTCGAACTGACGGCCGCGCTGGACTACAAGCTGTCCGCCCTGGCCCCGCGCGTGCCTAACGCCGAGCTGGAACAAGAG CTGCGCAAGACCCACACGCGCATCGCTACCGCCCAGGCCGAGCTGGACCACCGCCAGGACAGCAGCGACAACAACCGCCAATTGTTTGCCGGGCAGTCGC TGACGGCCGCCGAGCCGTTGATCGAGCCGCACGTCGATGCCCCTGAGCCCGCCGCTGCCCCGGCTGCCGCGCCGGTCGACCCGCGCCTGTTCGATGCGAT GCGCTCCGAGCTGTCGGGCCTGCGCGAGTTGCTGGAAGTGCAGCTCGGTTCGCTGGCCTGGAACCAGCTGCAAGGCAGCAAGCCACAGCAGGCCAATCTC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRTQLISNARNNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHG QEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMLIGMLQHGMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMI VMGLVPGMPHVAFLGLGLLACGGAYLVWKKQHKAKLDAQQEAQRQQDLLPSPQRALDTKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVVATH LNQILQKHCHELIGHEEVQQLLQVLSKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVRDIRSIAEAIANNAGKSQDTAALVAVVRVGLCRAIVQSIV GVESELPVITLEPRLEQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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