Strain | Pseudomonas putida H8234, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGCAGCGAGCCGCATCGCCAACTGCAAGCTGCCGGCCTGGCCCGGCGCCTGTTCGCCCTGGATGAGGATGTGCAAGCTCGCGCGGTCGGCAACGACTTG GCCAAAGCCGTGGACTACGCCGGGTTCGTCGAACTGTCGCTGCTTTACGACAAGGTCAACAGCTGGCTATGAGTACGCTCAACGTTGGCGATCAGGCGAT CGCCCTGGACAAGGACGGCTTTCTGGTCGACCTGCAAGACTGGTCCCGCGCCGCCGCCGAGGCTTTAGCCGAGCGCGAGGGTATCCCGTTGACGGCGGAC CATTGGGAAATCCTCGAACTGCTGCGCCAGTTCTACCAGGAATACCAGCTGTCCCCGGCCACGCGCCCACTGATCAAGTACACGGCCCTGAAGCTGGGCC CGGAAAAGGGCAACAGCCCGCACCTGAACCGCCTGTTCAATGGCACCCCCGCCAAACTTGCCGCCAAGCTGGCGGGCCTGCCCAAGCCGACCAACTGCAT
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DNA Sequence for Gene |
>L483_22395
ATGACCCAGCCCCTCTTGAAAGAAGTTCGCCCGCTCACGCTTGAAACCCCTGCCGAGCACCCGTTCGCCGAATTCGTGCGCATTCTCGGCAAAGGCAAGC GCGGCGCGCGCGGCCTGACCCGTGAAGAGGCCCGCGCGGCCATGACCCTGCTGCTGGAAGGCAAGGTCGAGGACACCCAGCTGGGCGCCTTCCTCATGCT GCTGCGCCACAAGGAAGAAAGCGCCGAAGAGCTGGCCGGCTTCACCGAGGCGCTGCGCGCCCACCTGCAGGCGCCGAGCATTGCGGTGGACCTGGACTGG CCCACTTACGCCGGCAAGAAGCGCCACCTGCCCTGGTACCTGCTGGCGGCCAAGTGCCTGGCCGGCAATGGCGTGCGCATCCTGATGCACGGCGGTGGCG CGCATACCGCCGGGCGGATGTACACAGAGCAACTGCTCGACCTGTTGCAGATCCCGCTGTGCCGCGACTGGGCTGCTGTGGGCAATACACTGGACCAGCA TCACCTGGCGTTTTTCCCGCTGCACGACTGGGCGCCGCAGTTGCAGCGCATGATCGACCTGCGCAACACCTTGGGCCTGCGCTCGCCCATCCACTCACTG GCCCGGGTGCTCAACCCGCTGGGCGCACGCTGTGGCCTGCAAAGCATCTTCCACCCGGGTTACCAGGCTGTGCACCGTGAGGCCAGCCGCCTGCTGGGCG ACCATGCCGTGGTGATCAAGGGCGATGGCGGTGAGATCGAAGTCAACCCCGATGTCATCAGCCACCTCTACGGGACGACGGCGGGCGAAGCATGGGACGA AGAATGGCCAGCGCTGAGCGAGCGCCGCCATGTCAAACCGGCCAGCCTGCAGGCCGAGCACTTGCGGGCGTTCTGGCGCGGTGAAGTGGAAGACAGTTAT GGCGAAAAAGCCCTGATCGCAACCATGGCCCTGGCCCTGCGTGGCCTGGGACAGAACCGCGAGCAGGCATTTGCGACAGCCCAAGGCTATTGGAATACGC GAGATAGATCGATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGATAATAGCACCTGGATCTTTGCGCTATTTGTTCGAACGATTTGGCCTAGACTGGGCTCCAACGACAAACAACTTTGTTTCAGGAGCTCGTCATGGGC CTTTTGATCGACGGCCGCTGGCACGACCAGTGGTATGAAAACGGCAAGGACGGCACGTTCAAACGCGAAAACGCCCAACGCCGCAATCAACTGCCGGCTC CCGAAGCCGGCCGGTACCACCTGTACGTCTCGCTGGCCTGCCCATGGGCCCACCGCACCCTGATCTTGCGCGCCCTCAAAGGCCTTGAGCCATTGATCGA TGTATCGGTGGTCAGCTGGCTGATGCAAGACCATGGCTGGACCTTCGACCAGCAGCAAGGCTCCAGCGGTGACCCCCTCGATGGCCTGCAGTACCTGCAC CAGCGCTATACCCAGGATGACCCACACTACACCGGCCGCGTGACTGTGCCGGTACTGTGGGACAAGAAAGAGAAACGCATCGTCAACAATGAATCGTCGG
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Amino Acid Sequence |
>hypothetical protein
MTQPLLKEVRPLTLETPAEHPFAEFVRILGKGKRGARGLTREEARAAMTLLLEGKVEDTQLGAFLMLLRHKEESAEELAGFTEALRAHLQAPSIAVDLDW PTYAGKKRHLPWYLLAAKCLAGNGVRILMHGGGAHTAGRMYTEQLLDLLQIPLCRDWAAVGNTLDQHHLAFFPLHDWAPQLQRMIDLRNTLGLRSPIHSL ARVLNPLGARCGLQSIFHPGYQAVHREASRLLGDHAVVIKGDGGEIEVNPDVISHLYGTTAGEAWDEEWPALSERRHVKPASLQAEHLRAFWRGEVEDSY GEKALIATMALALRGLGQNREQAFATAQGYWNTRDRSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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