Pseudomonas putida H8234, L483_19465
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida H8234, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCGCGCCCTCAAGGCGAGTGGCGACTGACGGTGGGCGGTTAATGTCTGCCCACCCCGGAATCAGGGCGCTGGCGGGGAACATGAAGATTTGTTCATC GCTGCTGCCTCTTGAGCGCTCAGGCACGGATTTGGGCGTCTTTTATGGATCCACAAAATTGTAGCGTTCGATAAACGAACAAAATTTTTATCCAGTATTA AATCTGTAAATACTTGATTAATATAGATAAACACAATTTTGTTTGATGATTTTATCTTTTTCATGAACGGTTTAACTGGGGGGACTAAGCCTTGCTCATT GTTTGTGGATCCATTATCTGGTTGATTGAGCGCCTGACAGCGGCAGGAGCCCTCCTGCCGTATGCGATAACAATTACAAAAAGGGTCCAAGTCATGAATG GCTTCTCACGGCCACGGAACCGTCATGGTTCCTACCGCTTCGCCTGCGTCTGCACATCTGTCCTCTCACTTGTGGCCAACCCAGGCCGGCAGGTGACCCT
|
|
| DNA Sequence for Gene |
>L483_19465
ATGAATGCCGATCTCAAGCAACGGCTGGACAACGACCCGATGGGCCGCTTTCAGTACCTGGCCATCGGTATTTGTATCGTCCTCAACATGATCGATGGCT TCGACGTCCTGGTGATGGCCTTCACCGCTGCCTCGGTGTCCGCCGAATGGGGCCTTAACGGGGCGCAGGTGGGGCTGCTGCTCAGTGCCGGCCTGTTCGG CATGGCGGCCGGTTCGTTGTTCATCGCGCCTTGGGCCGACCGCTTTGGCCGCCGCCCGCTGATCCTGCTGTGCCTGGCGCTTTCCGGTATTGGCATGTTG CTCTCGGCAATGAGCCAGAGCCCGTTGCAACTGGCGCTGCTGCGTGGCCTGACCGGGCTGGGCATTGGCGGCATCCTGGCCAGCAGCAATGTGATTGCCA GTGAGTACGCCAGCAAACGCTGGCGCGGCCTGGCGGTGAGCCTGCAGTCAACCGGCTACGCCCTGGGCGCGACGCTGGGCGGTTTGCTGGCGGTATGGCT GCTGGGGCATTGGGGTTGGCGCTCGGTGTTTTTGTTTGGCGGCATTGTCACCGTGCTGGTAATCCCGCTGGTGCTGTTGTGGCTGCCGGAGTCGCTGGAT TTTCTGCTGGCGCGTCGACCGGCCAATGCGCTGGCACGGGTCAACCGCCTGGCCATGCGCCTTGGCCAGCCGGCGCTGGCACACCTGCCAACACCCGTAG CAAGGGAGCCGGGCGCCGCCCGCGGCTTCCGGCAACTGCTGGCGCCGGCCATGCGCCGCACCACGCTGGTGATCTGGTTACTGTTCTTCCTGGTCATGTT CGGGTTCTACTTCGTCATGAGCTGGACGCCGAAACTGCTGGTCGCCGCCGGCCTGTCGGCACAGCAGGGCATCACCGGCGGGGTGCTGTTGAGTGTCGGC GGCATCCTCGGCGCGGCGCTGATCGGTGGCCTGGCGTCGCGCTGGCCACTCACCCGCGTGCTGGCGCTGTTCATGCTGATCACGGCGGCGTTGCTGGTGC TATTTGTGGTCAATGGCGCGTCGGTCAGTGCAGCCTTGGCCTTGGGGCTGCTGATCGGGCTGTTCTCCAACGGCTGCGTAGCCGGCCTGTATGCCCTGTC GCCGGTGGTCTATGACGCCTCGGTGCGCGCTACCGGCGTGGGTTGGGGTATTGGCATCGGCCGCATGGGCGCCATCTTGTCGCCGACCGTGGCCGGCGTG TTGCTCGATGGCGGCTGGCAGCCGCTGCACCTGTACGGGGTGTTTGCCAGCGTATTCGTGCTTGCCGCGGGTTGCCTGCTGTTGCTGCGCCCAATGACCA AGCCGGCGCCTGCGCAGCCGGCAGATGCACTGAGCCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCAACCCGGCCTGGCCGGGTACCTGAATGCAGCGTGCTGCCCTGGGCCAAGTTGGCCTGGGGCGTTCGGCTGCGCCTATTGAAAGCGGAGAACAATAA TAATGATGCACACAACCTGCACCCTGGCCCGTTCGGCTTCGGTGGTTTCGCTGGCGCTTGGTCTGGGTATGCCGGCTTGGGCCGAGGAGGGGGGCTTTTT TGAAGATGCCAAAGCCGGGCTGACACTGCGCAACTACTACTTCAACCGCGATTTCCGCGACCCAGGAGCGGCCAAGAGCAACGTCGAAGAATGGGCCCAG GGCTTCATCTTCAAGTTCAGCTCTGGCTACACCCCGGGGCTGATCGGTGTTGGCCTGGACGGCATCGCAATGTTCGGCATGAAGCTGGACAGTGGCCGCG GTACCAGCGGCTCCGAACTGCTGCCAGTGCACGATGACGGCCGTGCGGCCGACGAGTATGGCCGCGCCGGGCTGGCGGCCAAGCTGCGTATTTCATCGAC
|
|
| Amino Acid Sequence |
>MFS transporter
MNADLKQRLDNDPMGRFQYLAIGICIVLNMIDGFDVLVMAFTAASVSAEWGLNGAQVGLLLSAGLFGMAAGSLFIAPWADRFGRRPLILLCLALSGIGML LSAMSQSPLQLALLRGLTGLGIGGILASSNVIASEYASKRWRGLAVSLQSTGYALGATLGGLLAVWLLGHWGWRSVFLFGGIVTVLVIPLVLLWLPESLD FLLARRPANALARVNRLAMRLGQPALAHLPTPVAREPGAARGFRQLLAPAMRRTTLVIWLLFFLVMFGFYFVMSWTPKLLVAAGLSAQQGITGGVLLSVG GILGAALIGGLASRWPLTRVLALFMLITAALLVLFVVNGASVSAALALGLLIGLFSNGCVAGLYALSPVVYDASVRATGVGWGIGIGRMGAILSPTVAGV LLDGGWQPLHLYGVFASVFVLAAGCLLLLRPMTKPAPAQPADALSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|